Pseudonocardia alni: PaSha_20915
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Entry
PaSha_20915 CDS
T11230
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
palq Pseudonocardia alni
Pathway
palq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
palq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PaSha_20915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palq03400
]
PaSha_20915
Enzymes [BR:
palq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PaSha_20915
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PaSha_20915
DNA repair and recombination proteins [BR:
palq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PaSha_20915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WFG45499
LinkDB
All DBs
Position
4267619..4268425
Genome browser
AA seq
268 aa
AA seq
DB search
MPELPEVENARTVLADAVGRTITAVDDRDDWVCRPHRPGDIASALKGGRLTRANRIGKTM
WCDTETADGEAGPALGVHLGMGGRIVVTDSDGERIGGGPARPDRQPRKAEWDRFTMTFDD
GGQFRLFDKRRLGRVRLDPDLSGLGPDAEGMKPAEFRDRLLRGTSAVKARLLDQSVLAGV
GNLLADETLWQARISPKAPVRDLTRTDLDRLHRNLDRALERAVANGGVHTGEIVEHRHPG
GHCPRCGAEMVHGTVGGRSTWWCPQEQV
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcccgaggtggagaacgcacgcacggtcctcgccgatgccgtcggccgc
acgatcaccgccgtcgacgaccgcgacgactgggtctgccgcccgcaccggcccggtgac
atcgcctcggcgctgaagggcgggcggctcacccgggcgaaccggatcggcaagaccatg
tggtgcgacaccgagaccgccgacggcgaggcggggcccgcgctcggcgtgcatctcggg
atgggcggacggatcgtcgtcaccgactccgacggcgagcgcatcggcggcggccccgcc
cgccccgaccggcagccgcgcaaggccgagtgggaccggttcaccatgaccttcgacgac
ggcgggcagttccggctgttcgacaagcgccgtctcggccgggtccggctcgaccccgac
ctgtccggtctcggccccgacgcggaggggatgaagccggccgagttccgcgaccggctg
ctgcgcggcacgtcggcggtgaaggcacggctgctcgaccagtccgtgctggcaggcgtc
gggaacctgctggccgacgagacgctgtggcaggcgcggatctcgccgaaggccccggtg
cgcgacctgacccgcaccgacctggaccggctgcaccgcaacctcgaccgcgcgctggag
cgggccgtcgcgaacggtggcgtgcacaccggtgagatcgtcgagcaccggcacccgggt
gggcactgcccgcgctgcggggccgagatggtgcacgggaccgtcggcgggcggtcgacc
tggtggtgcccgcaggagcaggtctga
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