Pseudonocardia alni: PaSha_21965
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Entry
PaSha_21965 CDS
T11230
Name
(GenBank) DEAD/DEAH box helicase
Organism
palq Pseudonocardia alni
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WFG45665
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All DBs
Position
complement(4483505..4486588)
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AA seq
1027 aa
AA seq
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MFVVHALHSPTRGVLLWAEDGERAPRTDRRSLRTARPHPFAVPSDELAAIHPGKPASVTV
LLPSHPSGPQDSPGLVRSRPRTRSRSTPTLAPWTVPAVVVDPSELTDPSDEVRYGAGFAH
LADLARLAEELAARGRVLPVLLTESGRPAAHWRPVVQGLDAVARADLVRRLPPVARAEQR
RPGDVAGQDPDTLVDAALARFTDAAVRERLGRSAAMPVPLPARADAPAALLHALTGPSAD
LPATGAGLRVLREALAAWDDVGREQPGAATALFRLAEVSTLHDPADPGPDLDDQTGDGTR
WELQFALRSTEDPSLVFDAAGVWAGEADALVSGAQDVLLAELGRAAQVLPGLVPALRRAR
PTGLELDVTGAHRFLTRDAPALLSAGFGVALPRGWDGRRPLGLRLSTSSAPAPGVITRGG
LGRDELAEFRWSLAVGDEELGESEIAALVAAKAPLVRLRGRWVAVDAQALAQGLDFLRRH
RDRPPTVGEVLAAARGDAGAPLPVTDVSARGHLGALLEGTAERTLTPVPAPPGFTATLRP
YQERGVAWLAFLSSLGLGACLADDMGLGKTVQLLALEAHDRSGGPTGAPTLIVCPMSMVG
TWQREAATFAPGLRVHAHHGAARPRGEALHARLGEADLVVTTYATATRDAEDLRAWRFHR
LVLDEAQMIKNAHAAASRTMRSFDAGHRVALTGTPMENRLAELWSVMDFLNPGVLGVPEV
FRQRFAVPIERHRDAGTARTLRRITRPYLLRRVKTDPTVIDDLPEKIEIVADHRLTREQA
SLYRTVVDDMMEKIEGSDGIERRGNVLAAMSKLKQVCNHPAQLLHDGSPIHRSGGRHRSG
KVARLEEILEPVLAAGDRALLFTQYTEFAAMLRPHLSARFDTEVLYLHGGTPKKRRDEMV
ARFQSGEGPSLFLLSLRAGGTGLTLTAANHVIHLDRWWNPAVEDQATDRAFRIGQRRAVQ
VRRFVCPGTVEERIEDLVTAKRSLSDMVVTGGEDWLTSLSTSELRAVFALGSDAVADLDE
ETGDADE
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgtcgtccacgccctgcactcccccacccggggcgtcctgctgtgggcggaggac
ggcgagcgcgcaccccgcaccgaccgccggtcgctgcgcacggcgcggccgcacccgttc
gccgtgccgtcggacgagctggccgcgatccatccgggcaagccggcgtcggtgacggtg
ctgctgccctcgcacccgtcgggcccgcaggactcccccggcctggtccggtcccggcca
cgcacccggagccggagcacgccgacgctggcgccgtggacggtgccggcggtcgtcgtc
gacccctccgagctgaccgacccgtccgacgaggtccgctacggcgccgggttcgcccac
ctcgccgacctcgcccggctcgccgaggagctcgcggcccgcggccgggtgctgccggtc
ctgctcaccgagtccggccggcccgcggcgcactggcgcccggtcgtccagggtctcgac
gcggtcgcccgcgccgacctggtccggcggctgcccccggtcgcgcgggccgagcagcgc
cgcccgggcgacgtcgccgggcaggacccggacaccctggtcgacgccgcgctcgcccgg
ttcaccgacgccgccgtccgcgagcggctggggcgcagcgccgcgatgcccgtcccgctg
cccgcccgcgcggacgccccggcggcgctgctgcacgccttgaccggcccgtcggcggac
ctgcccgcgaccggtgcggggctgcgggtgctgcgcgaggcactggccgcgtgggacgac
gtcggccgcgagcagcccggcgccgccaccgcgctgttccggctcgccgaggtctccaca
ctgcacgacccggccgaccccggcccggacctcgacgaccagaccggcgacggcacccgg
tgggagctccagttcgcgctgcgctccaccgaggacccgagcctggtgttcgacgcggcc
ggggtgtgggccggggaggccgacgccctggtctccggcgcgcaggacgtgctgctggcc
gagctggggcgggccgcgcaggtcctgcccgggctcgtgcccgcactgcgccgggcccgc
ccgaccgggctcgagctcgacgtcaccggggcgcaccggttcctcacccgggacgcgccc
gcgctgctgtcggccgggttcggggtggcgctcccgcgcgggtgggacgggcgccgcccg
ctggggctgcgactctcgacgtcgtcggccccggcgccgggggtgatcacccgcggcggg
ctgggccgtgacgagctggcggagttccgctggtcgcttgccgtcggcgacgaggagctg
ggcgagtccgagatcgccgcgctggtggctgcgaaggcgccgctggtccggctgcgcggg
cgctgggtcgccgtcgacgcccaggcactggcccaggggctggacttcctgcgtcgccac
cgggaccggccgcccaccgtcggcgaggtgctggccgcggcccgtggcgacgcgggcgcc
ccgctcccggtgaccgacgtgtccgcccgcgggcacctcggggcgctgctggagggcacc
gccgagcggacgctcacaccggtgccggcgccgccggggttcaccgcgacgctgcgcccc
taccaggagcgcggggtggcgtggctggcgttcctgtcgtcgctgggcctgggggcgtgc
ctggccgacgacatggggctgggcaagaccgtccagctcctggccctggaggcccacgac
cggtccggcgggccgaccggcgccccgaccctgatcgtgtgcccgatgtcgatggtcggc
acctggcagcgggaggccgcgacgttcgcacccggcctgcgggtgcacgcccaccacggg
gccgcccgcccgcgcggcgaggccctgcacgcccggctcggcgaggccgacctcgtcgtc
accacgtacgcgaccgcgacccgcgacgccgaggacctgcgggcgtggcggttccaccgc
ctcgtcctcgacgaggcccagatgatcaagaacgcgcacgccgcggcgtcgcgcacgatg
cggtcgttcgacgccggccaccgggtcgcgctgaccggcaccccgatggagaaccggctg
gccgagctgtggtcggtgatggacttcctcaaccccggcgtcctcggggtgccggaggtg
ttccggcagcggttcgcggtgccgatcgagcgccaccgcgacgccgggacggcccgcacc
ctgcgccggatcacccggccctacctgctgcggcgggtcaagaccgaccccacggtgatc
gacgacctccccgagaagatcgagatcgtggccgaccaccggctcacccgggagcaggcg
tcgctgtaccggaccgtcgtcgacgacatgatggagaagatcgagggcagcgacggcatc
gagcgccgcggcaacgtgctggccgcgatgagcaagctcaagcaggtctgcaaccacccc
gcgcagctgctgcacgacgggtcgccgatccaccgcagcggcgggcggcaccgctcgggc
aaggtcgcccggctggaggagattctggagccggtgctggccgccggggaccgggcgctg
ctgttcacccagtacaccgagttcgccgcgatgctacgcccgcacctgtcggcacggttc
gacaccgaggtgctctacctgcacggcggcaccccgaagaagcggcgcgacgagatggtc
gcccggttccagtccggggagggaccgtcgctgttcctgctctcgctgcgcgcgggcggc
accgggctcacgctcaccgcggcgaaccacgtgatccacctggaccggtggtggaacccg
gcggtggaggaccaggccaccgaccgggcgttccggatcgggcagcggcgcgcggtgcag
gtgcgccggttcgtgtgcccggggacggtcgaggagcggatcgaggacctggtcacggcg
aagcggtcgctgtcggacatggtggtgaccggcggggaggactggctgacgtcgctgtcg
acctccgagctgcgtgcggtgttcgcgctcggctcggacgcggtggccgacctcgacgag
gagacgggggacgccgatgagtga
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