Pseudonocardia alni: PaSha_22205
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Entry
PaSha_22205 CDS
T11230
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
palq Pseudonocardia alni
Pathway
palq03030
DNA replication
palq03410
Base excision repair
palq03420
Nucleotide excision repair
palq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PaSha_22205 (polA)
03410 Base excision repair
PaSha_22205 (polA)
03420 Nucleotide excision repair
PaSha_22205 (polA)
03440 Homologous recombination
PaSha_22205 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palq03032
]
PaSha_22205 (polA)
03400 DNA repair and recombination proteins [BR:
palq03400
]
PaSha_22205 (polA)
Enzymes [BR:
palq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PaSha_22205 (polA)
DNA replication proteins [BR:
palq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PaSha_22205 (polA)
DNA repair and recombination proteins [BR:
palq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PaSha_22205 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PaSha_22205 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
HHH_2
ERp29_N
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
WFG45707
LinkDB
All DBs
Position
4532161..4534956
Genome browser
AA seq
931 aa
AA seq
DB search
MSTATQGTQKSASAKKKAPAKPRLLLLDGHSLAYRAFFALPAENFRTGTGQTTNAVYGFT
SMLINLLRDEEPTHLAVAFDVSRTTFRSERYAEYKANRSSTPDDFRGQIDLIKEVLAALN
IPVFAVEGFEADDLIATLATQAEGRGYQVLITTGDRDAFQLVTDDVTVLYPKRGVSDLGR
IDPAEVDKRYGLTPAQYPDFAALRGDPSDNLPSIPGVGEKTAAKWVREFGSLAELTDRVD
EVKGKAGDNLRANLANVLLNRQLTELVRDVDLGAAPEELELRPWDRDAVHRLFDELEFRV
LRERLFSTLSSAEPEAESGFEVSGEVVAPGAVRAWLDAHARDGRRVAVSFAGVTGPIAGR
DLDGIALATGEPTVEQRAAGATAGVPAAGYLALTGLTPDDEAALGDWLADASVPKAAHDV
KAVLHALRARGWTLGGLTSDTALAAYLAKPGQRTFDLADLALRYLRRELRTEEPADGQLS
LLGGEEEADTRAAEQEMLAASAIAELADALDADLAERGGSELLADLELPLAFVLADCEAA
GIAVDGETLSDLESDFGAQVREAARQAYEVIGKEINLGSPKQLQVVLFDELEMPKTKRTK
TGYTTDADALASLYEQTEHPFLQFLLQHRDATRLKVTVDGLMKSVAEDGRIHTTYSQTIA
ATGRLSSTDPNLQNVPIRTAAGRRIRDAFVVGSGPDGAPYAELLTADYSQIEMRIMAHLS
EDAALIEAFRSQHDFHAETAARVFGVAATEVSPEQRAKIKAMNYGLAYGLSAYGLSGQLR
ISTEEAKGLMDDYFAGFGGVRDYLAGVVDQARKDGYTATILGRRRYLPDLTSDNRQRREM
AERMALNAPIQGSAADIIKVAMLGVYRALQAEGLRSRMLLQVHDELVLEVAHGERETLEA
LVRREMAAAADLSVPLEVSVGSGRSWDAAAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagcgacgcagggcacccagaagtcggcctcggcgaagaagaaggcaccggcg
aagccgcgcctgttgctgctcgacggccactccctggcctaccgggcgttcttcgcgctg
cccgcggagaacttccgcaccggtaccgggcagaccacgaacgcggtctacggcttcacc
tcgatgctgatcaacctgctgcgcgacgaggagccgacccacctcgcggtcgccttcgac
gtgtcgcgcacgacgttccgctccgagcgctacgccgagtacaaggcgaaccgctcgtcg
acgccggacgacttccgcggccagatcgacctcatcaaggaggtcctggccgcgctgaac
atcccggtgttcgccgtcgaggggttcgaggccgacgacctcatcgccaccctcgccacc
caggccgaggggcgcggctaccaggtgctcatcaccaccggcgaccgcgacgcgttccag
ctggtcaccgacgacgtcaccgtcctgtaccccaagcgcggcgtgtccgacctcggccgg
atcgacccggccgaggtcgacaagcgctacgggctcaccccggcccagtacccggacttc
gcggcgctgcgcggcgacccctcggacaacctgccctccatccccggggtgggggagaag
accgcggcgaagtgggtccgggagttcggctcgctcgccgagctcaccgaccgggtcgac
gaggtcaagggcaaggccggggacaacctgcgggccaacctggcgaacgtgctgctcaac
cgccagctcaccgagctggtgcgcgacgtcgacctcggcgccgcccccgaggagctcgag
ctgcgcccgtgggaccgcgacgcggtgcaccgcctgttcgacgagctggagttccgggtg
ctgcgcgagcgcctgttctccaccctgtcctccgccgagcccgaggccgagtccggcttc
gaggtctccggcgaggtcgtcgcacccggcgcggtgcgggcctggctcgacgcccacgcc
cgcgacgggcgtcgggtcgcggtgagcttcgccggggtcaccggcccgatcgccgggcgc
gacctcgacgggatcgcgctcgccacgggggagccgaccgtcgagcagcgggccgccggc
gccaccgccggtgtcccggccgccggctacctcgcgctgaccggcctcaccccggacgac
gaggcggccctgggcgactggctcgccgacgcgtccgtgccgaaggccgcgcacgacgtg
aaggcggtgctgcacgcgctgcgggcgcggggctggaccctgggcgggctgaccagcgac
accgcgctcgccgcgtacctcgccaagcccgggcagcggacgttcgacctggccgatctc
gcgctgcgctacctgcgccgcgagctgcgcaccgaggagcccgccgacggtcagctgtcg
ctgctcggcggtgaggaggaggccgacacccgggccgcggagcaggagatgctcgcggcc
tcggcgatcgccgagctcgccgacgccctggacgccgatctcgccgagcggggcggcagc
gagctgctggccgacctggagctgccgctggcgttcgtgctggccgactgtgaggcggcc
gggatagccgtcgacggtgagaccctgtccgacctggagtcggacttcggcgcccaggtc
cgcgaggccgcgcggcaggcctacgaggtgatcggcaaggagatcaacctcggctcgccc
aagcagctgcaggtcgtgctgttcgacgagctggagatgcccaagaccaagcgcaccaag
accggatacaccaccgacgcggacgcgctggcgagcctctacgagcagaccgagcacccg
ttcctgcagttcctgctgcagcaccgggacgcgacccggctcaaggtgaccgtcgacggg
ctcatgaagtccgtcgccgaggacggccggatccacaccacctactcgcagacgatcgcc
gcgaccggccggctgtcctcgaccgacccgaacctgcagaacgtgccgatccgcaccgcc
gccgggcgccggatccgggacgcgttcgtcgtcgggtccggccccgacggcgcgccgtac
gcggagctgctcaccgcggactacagccagatcgagatgcggatcatggcccacctgtcc
gaggacgccgcgctgatcgaggccttccgctcacagcacgacttccacgccgagaccgcc
gcccgggtcttcggcgtcgcggcgaccgaggtgtcgcccgagcagcgcgccaagatcaag
gcgatgaactacggcctggcctacgggctgtcggcctacggcctgtccgggcagctgcgg
atctccaccgaggaggcgaaggggctgatggacgactacttcgccgggttcggcggggtg
cgcgactacctcgcgggagtcgtcgaccaggcccgcaaggacggctacaccgccaccatc
ctgggaaggcggcgctacctgcccgacctgaccagcgacaaccggcagcgccgggagatg
gccgagcggatggcgctcaacgccccgatccagggcagcgcggcggacatcatcaaggtc
gcgatgctcggggtctaccgggcgctgcaggccgaggggttgcgcagccggatgctgctg
caggtgcacgacgagctcgtcctcgaggtcgcccacggcgagcgcgagaccctggaggcg
ctcgtgcgccgggagatggcggccgcggccgacctgtcggtgccgctggaggtgtcggtc
ggctccggccgcagctgggacgccgcggcgcactga
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