Pseudonocardia alni: PaSha_23235
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Entry
PaSha_23235 CDS
T11230
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
palq Pseudonocardia alni
Brite
KEGG Orthology (KO) [BR:
palq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palq03000
]
PaSha_23235
Transcription factors [BR:
palq03000
]
Prokaryotic type
Helix-turn-helix
Other families
PaSha_23235
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Gene cluster
GFIT
Motif
Pfam:
HTH_8
AAA_lid_14
HTH_30
HTH_50
HTH_7
Xre-like-HTH
HVO_A0261_N
AAA_22
HTH_23
HTH_Tnp_IS1
UBA
Motif
Other DBs
NCBI-ProteinID:
WFG46989
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Position
complement(4748972..4750690)
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AA seq
572 aa
AA seq
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MPALSAGQRLRIRRSRETLVDGGLLALPPGHAGVPPLIEQSWRRCIGEAVPTAPDRIGYA
DPGDDHTALRRAAAPVLERLVDSFADVPVAMVLSDATGRIVRRHVGVRRQRTLMDRASAV
EGSDFSERSVGTNGIGTVLVERRPVLVRGPEHYNALLENLTCAGTPLVEPGTGRTVGSLS
LACAVRDVHPLMAVMAADIGRQIEARLLDEAGEHRRRLVRAYLALERATTGALVVDADTV
LADRHALAHAGPDLHTLLWDLLRDGGPDRPRRMRVPMPDGPHDAVVAPVEGTGGTAFSIR
LAPRRAAPAVAAPATVRGAALHHDPEVDHRLREAVSHRETVAVTGPGGSGKLRTARRVLS
RLGHDGAVVVEPHREPEWWETARAALAAGRGLVLRRVHLSPGPRPALLRDLAATGVPFVL
TADADPTDDTTPALLGQVATTVRLPALAAGREHLPALVETLLAELPPPASGSRLSGAALD
RLRAWHWPGDLAELRAVVTAAARRADGGTADEADLPDRLRTAGRELGLLEAAERDAVVDA
LRAAGGNRTRAARTLGIGRNTLYRKLREFGVS
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
gtgccggccctgtcggccgggcagcgcctgcgcatccggcgcagccgcgagacgctcgtc
gacggggggctgctggcgctgccgcccggccacgcgggcgtgccgccgctgatcgagcag
agctggcggcgctgcatcggcgaggcggtgccgacggcgccggaccgcatcggctacgcc
gaccccggcgacgaccacaccgcgctgcgccgggccgcggcgcccgtgctggagcggctc
gtggacagcttcgccgacgtcccggtggccatggtgctgtccgacgcgaccgggcgcatc
gtccgccgccacgtcggcgtccggcgccagcgcacgctgatggaccgggcgagcgcggtg
gagggctcggacttctccgagcggtcggtgggcaccaacggcatcggcacggtgctggtc
gaacgacgcccggtcctggtccggggccccgagcactacaacgccctcctggagaacctc
acctgcgcgggcaccccgctggtcgagcccgggaccggccggacggtgggctcgctctcg
ctggcctgcgcggtgcgcgacgtgcacccgctcatggcggtgatggccgccgacatcggc
cgccagatcgaggcccggctgctcgacgaggcgggcgaacaccgtcgcaggctggtgcgg
gcctacctcgcgctggagcgggccacgaccggggcgctggtcgtcgacgccgacaccgtc
cttgccgaccggcacgcgctggcccacgccggcccggacctgcacaccctgctgtgggac
ctcctgcgcgacgggggcccggaccggccacgccggatgcgggtgccgatgcccgacggc
ccgcacgacgcggtcgtcgccccggtcgagggcaccggggggaccgcgttcagcatccgg
ctggcgccccgccgggcagcacccgcggtggcggccccggccaccgtccggggagccgcg
ctccaccacgacccggaggtcgaccaccggctccgcgaggccgtctcccaccgggagacc
gtcgccgtgaccggccccggcggcagcggaaagctgcggaccgcccgccgcgtgctgtcc
cgcctgggccacgacggcgccgtggtcgtcgagccgcaccgggagcccgagtggtgggag
acggcccgcgcggcgctggccgccggtcgcgggctcgtcctgcggcgggtgcacctgtca
ccggggccgcgcccggcgctcctgcgggacctggccgcgaccggcgtcccgttcgtcctc
accgccgacgccgaccccaccgacgacaccacccccgccctcctcggccaggtcgccacc
accgtccgcctcccggcgctcgcggcgggccgcgagcatctcccggcgctggtggagacg
ctgctcgcggagctgcccccgcccgcgtcgggctcccggctgtccggcgcggccctggac
cggctccgggcctggcactggcccggtgacctggccgagctccgcgccgtggtcacggcg
gcggcccgccgcgccgacggcggtacggccgacgaggccgacctccccgaccgcctgcgc
accgcaggccgggagctcggtctgctggaggccgccgaacgcgacgccgtggtcgacgcc
ctgcgcgcggcgggcgggaaccgcacccgggccgcccgcacgctcgggatcgggcgcaac
accctctaccggaagctgcgcgagttcggggtgtcctga
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