KEGG   Pseudonocardia alni: PaSha_25290
Entry
PaSha_25290       CDS       T11230                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
palq  Pseudonocardia alni
Pathway
palq00061  Fatty acid biosynthesis
palq00071  Fatty acid degradation
palq01100  Metabolic pathways
palq01212  Fatty acid metabolism
palq02024  Quorum sensing
palq04146  Peroxisome
Module
palq_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:palq00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    PaSha_25290
   00071 Fatty acid degradation
    PaSha_25290
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    PaSha_25290
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PaSha_25290
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:palq01004]
    PaSha_25290
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:palq04147]
    PaSha_25290
Enzymes [BR:palq01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     PaSha_25290
Lipid biosynthesis proteins [BR:palq01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   PaSha_25290
Exosome [BR:palq04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   PaSha_25290
  Exosomal proteins of breast cancer cells
   PaSha_25290
SSDB
Motif
Pfam: AMP-binding AMP-binding_C baeRF_family10 bL31_N
Other DBs
NCBI-ProteinID: WFG47051
LinkDB
Position
complement(5181724..5183403)
AA seq 559 aa
MDLQGQLGTIDVTRLRGRRAVNRWERTSVGDVFERLTWSYPEKTAITGRPGAYGEERFAS
VTYREADGITSQVAHALAARGLEPGARVLLFCENSVEAYLAKVGVAKAGMVAVPVNPALA
PDVLEHLIGQAEPGLAIVDAELWPRAEQVFTATGLRVGATITIGGGPVAGSPSFGGLLEG
LPTTEPDVEIHADDIWEILYTSGTTAMPKGVMISHGSTHLAALNFTVSLTRGLRVETDLR
VATALPVIYHVGDQIFTFSAFLAGGSLVLGRRPLPDQLVATIADERPTALWAGSPQFVAA
IDAVAERTGADLSSLTVLVYGWGALEPAVYARLQDRAPGLVVLGIFGQTEAIACHRFWPA
TWSEVYARTAPSVNYVGVPSPLLASDVVDETGVSVRDTPHVPGEAVYRSPVVTAGYYLNE
EATREAFRGGWFHSGDSAAVDEDGLRIMVDRFKDIVKSGGENVSSLRVESVLHGHPAVEK
AAVIGLPHPHWGEAVTAVVVLREGAEADAESIIAHCRATLGGYETPKAVVFVDGLPETVG
GKVLKYRLRARHGALFEQV
NT seq 1680 nt   +upstreamnt  +downstreamnt
gtggacctgcagggacagctcgggacgatcgatgtcacgcgtctgcgcggacgacgtgcg
gtgaaccggtgggagcggacctcggtcggggacgtgttcgagcgcctgacctggagctac
cccgagaagaccgcgatcaccggccggcccggtgcctacggcgaggagcggttcgcctcc
gtcacctaccgcgaggccgacgggatcaccagccaggtcgcccacgctctcgcggcccgg
gggctggagccgggtgcgcgggtgctgctgttctgcgagaactccgtcgaggcctacctg
gccaaggtcggtgtcgcgaaggcgggcatggtcgccgtgccggtgaacccggccctcgcc
ccggacgtgctcgagcacctgatcggacaggccgagccgggcctggcgatcgtcgatgcg
gagctgtggccgcgggccgagcaggtcttcaccgccaccgggctgcgtgtcggtgccacg
atcacgatcggcggcgggcccgtcgcggggagcccgagcttcgggggcctcctcgagggt
ctgccgacgaccgagcccgacgtcgagatccacgcggacgacatctgggagatcctctac
acctcgggcaccacggcgatgcccaagggcgtgatgatctcgcacgggtcgacccacctc
gccgcgctgaacttcacggtctcgctcacccgcggcctgcgggtggagaccgacctcagg
gtcgccaccgcgctcccggtgatctaccacgtcggcgaccagatcttcaccttctcggcg
ttcctggccggtggctccctggtgctgggccggcgcccgctgcccgaccagctcgtggcc
acgatcgccgacgagcgcccgaccgcgttgtgggcgggctccccgcagttcgtcgccgcg
atcgacgccgtggcggagcggaccggagcggacctgtccagcctgaccgtgctggtgtac
ggctggggtgccctcgaaccggccgtgtacgcgcggctgcaggaccgggcccccggcctc
gtggtgctgggcatcttcgggcagaccgaggcgatcgcctgccaccggttctggcccgcc
acgtggagcgaggtctacgcgcggacggctccgtcggtgaactacgtcggcgtcccgagc
ccgctcctcgcctccgacgtcgtcgacgagaccggggtgtcggtccgggacaccccgcac
gtcccgggcgaggcggtgtaccgcagtcccgtcgtcaccgcgggctactacctgaacgag
gaggccacacgggaggcgttccgcggcggctggttccactccggggacagcgcagccgtc
gacgaggacggtctgcggatcatggtggaccgcttcaaggacatcgtgaagtccggtggg
gagaacgtctccagcctgcgggtggagtccgtcctgcacgggcacccggccgtggagaag
gcggcggtgatcgggctgccgcacccccactggggcgaggccgtgacagcggtcgtcgtg
ctgcgggagggcgcggaggccgacgcggagtcgatcatcgcgcactgccgggcgacgctg
ggcgggtacgagacgccgaaggcggtcgtgttcgtggacggcctgcccgagaccgtgggc
ggcaaggtcctgaagtaccggctccgcgctcggcacggcgccctgttcgagcaggtctga

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