Pseudonocardia alni: PaSha_28350
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Entry
PaSha_28350 CDS
T11230
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K03892
ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
Organism
palq Pseudonocardia alni
Brite
KEGG Orthology (KO) [BR:
palq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palq03000
]
PaSha_28350
Transcription factors [BR:
palq03000
]
Prokaryotic type
Helix-turn-helix
ArsR family
PaSha_28350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_5
HTH_20
MarR_2
HTH_24
Fe_dep_repress
TrmB
Rrf2
DUF2513
HTH_Crp_2
HTH_34
HTH_IclR
HTH_DeoR
Motif
Other DBs
NCBI-ProteinID:
WFG47360
LinkDB
All DBs
Position
pPaSha1:complement(335237..335620)
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AA seq
127 aa
AA seq
DB search
MSNQRAVEVVDSACDSVLVDRPLDEARSGELARTFKAIGDPVRLRLLSLIASHAGGEACV
CDVSEVFDVSGPTISHHLKVLREAGLITGERRGTWVYYRVVPQTLARLSALLAPQQRVDR
AAEPASA
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcagcgagctgtggaggtcgtggactcggcatgcgattcggtgctggtcgac
cggccgctcgacgaggcacggtcgggtgagctggctcggacgttcaaggcgatcggggat
ccggttcgtctgcgtctgctgtcgctgatcgcctcccacgccggcggcgaagcttgcgtg
tgcgacgtgtccgaggtgttcgacgtgtccggacccacgatctcgcaccacctcaaggtg
ctgcgcgaggccggtctgatcaccggcgagcggcgagggacctgggtctactaccgggtg
gtaccccagaccctcgctcgcctgtccgcgctgctcgcgccgcagcagcgggtcgaccgc
gcggcggagcccgcctccgcctga
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integrated database retrieval system
