KEGG   Paenibacillus albicereus: HGI30_02710
Entry
HGI30_02710       CDS       T07921                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
palr  Paenibacillus albicereus
Pathway
palr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:palr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HGI30_02710 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:palr03400]
    HGI30_02710 (uvrB)
DNA repair and recombination proteins [BR:palr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HGI30_02710 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      HGI30_02710 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR UvrD-helicase DEAD AAA_22 AAA_7 AAA_30 AAA_16 AAA_19 Kinesin AAA_5 HEM4 AAA_lid_11 Uncharacterised_IM_YidI TrwB_AAD_bind DUF87
Other DBs
NCBI-ProteinID: QJC54159
UniProt: A0A6H2H3J0
LinkDB
Position
627322..629325
AA seq 667 aa
MAEKAQQTKLFQLKSDYTPQGDQPGAISRLVEGVREGRKHQILLGATGTGKTYTIANTIA
QLNRPTLVIAHNKTLAAQLCSEFQEFFPDNAVSYFVSYYDYYQPEAYLPSTDTYIEKDSS
INDEIDKLRHSATSSLFERRDVIIVASVSCIYGLGSPSEYGSLVMSLRKGMEKGRDQILH
KLVDIQYQRNDINFVRGTFRVRGDIVEIFPVASNERAIRVELFGDEIERITEIDVLTGEI
VGERDHVAIFPASHFVTHEDKMKIALVNIERELEERLAELRENGKLLEAQRLEQRTRYDI
EMMQEMGFCSGIENYSGPLTFRERGATPFTLMDYFPDDMLIVIDESHVTLPQVRAMYNGD
RARKEVLVEHGFRLPSAMDNRPLKFEEFEAKDKQTIYVSATPGPYELETSPHEPVQQIIR
PTGLLDPIIEVRPTKGQIDDLLGEIRDRIAKDERVLVTTLTKKMSEDLTDYLKEVGIKVR
YLHSDIKTLERMAILRDLRVGTFHVLVGINLLREGLDLPEVSLVSILDADKEGFLRSERS
LIQTIGRAARNSEGRVIMYGDKITDSMDRAISETQRRRTIQEAYNEKHGITPQTIRKRIH
EVIEATKSAESKSGVLDGLSGGKLTKKERQQVINRLEAEMKEAAKSLQFERAAELRDALL
ELRAEEG
NT seq 2004 nt   +upstreamnt  +downstreamnt
atggccgagaaggctcagcagaccaagcttttccagctgaagtccgactatacgccgcag
ggcgaccagccgggcgcgatcagccggctcgtcgagggcgtccgcgagggacgcaagcat
cagatcctgctcggagcgaccggcacgggcaagacctatacgatcgccaacacgatcgcc
cagctcaatcggccgacgctcgtcatcgcccacaacaagacgctcgccgcgcagctctgc
agcgagttccaggagttcttccccgacaacgccgtctcctacttcgtcagctactacgac
tactaccagcccgaagcctacctcccgtcgaccgacacctacatcgagaaggactccagc
atcaacgacgagatcgacaagctgcgccactccgcgaccagctcgctgttcgagcgccgc
gacgtcatcatcgtcgccagcgtgtcgtgcatctacggcctgggatcgccgtcggagtac
ggcagcctcgtgatgtcgctgcgcaagggcatggagaagggacgcgaccagatcctgcac
aagctcgtcgacatccagtatcagcgcaacgacatcaacttcgtgcgcggcacgttccgc
gtgcgcggcgacatcgtcgagatcttccccgtggcgagcaacgagcgcgcgatccgcgtc
gagctgttcggcgacgagatcgagcgcatcacggagatcgacgtcctgaccggcgagatc
gtcggcgagcgcgaccatgtcgcgatcttcccggcttcccacttcgtcacccacgaggac
aagatgaagatcgcgctcgtcaacatcgagcgggagctggaggagcggctcgccgagctg
cgggagaacggcaagctgctggaggcgcagcggctggagcagcgcacgcgctacgacatc
gagatgatgcaggagatgggcttctgctccggcatcgagaactactccggtccgctcacg
ttccgcgagcgcggcgccacgccgtttacgctcatggactatttcccggacgacatgctc
atcgtcatcgacgagtcccatgtgacgctgccgcaggtgcgcgccatgtacaacggcgac
cgcgcgcgcaaggaggtgctcgtcgagcacggcttccggctgccgtcggcgatggacaac
cggccgctcaagttcgaggagttcgaggccaaggacaagcagacgatctacgtctcggcg
acgccggggccgtacgagctggagacgtcgccgcatgagccggtgcagcagatcatccgt
ccgaccggcctgctcgatccgatcatcgaggtgcgtccgaccaagggccagatcgacgac
ctgctcggcgagatccgcgaccgcatcgccaaggacgagcgcgtgctcgtcacgaccctc
accaagaagatgtccgaggacctgaccgactatctgaaggaagtcggcatcaaggtgcgc
tacctccactccgacatcaagacgctggagcggatggcgatcctgcgcgacctgcgcgta
ggcacgttccatgtgctcgtcggcatcaacctgctgcgggagggcctcgacctgccggag
gtgtcgctcgtctcgatcctcgacgccgacaaggaaggcttcctgcgctcggagcgctcg
ctcatccagacgatcggacgcgcggcgcgcaactccgagggacgggtcatcatgtacggc
gacaagatcaccgactccatggaccgggcgatctccgagacgcagcgccgccgcaccatc
caggaggcgtacaacgagaagcacggcatcacgccgcagacgatccgcaagcggatccac
gaggtcatcgaggcgaccaagtccgcggagtccaagtcgggcgtgctcgacggcctgtcc
ggcggcaagctgaccaagaaggagcggcagcaggtcatcaaccgcctcgaggcggagatg
aaggaagcggccaagagcctgcagttcgagcgggcggccgagctgcgcgacgcgctgctc
gagctgcgggccgaagagggctga

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