KEGG   Paenibacillus albicereus: HGI30_12045
Entry
HGI30_12045       CDS       T07921                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
palr  Paenibacillus albicereus
Pathway
palr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:palr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HGI30_12045 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:palr03019]
    HGI30_12045 (rny)
Messenger RNA biogenesis [BR:palr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HGI30_12045 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 KH_KhpA-B HDOD KH_2 Propep_M14 DUF3810 DUF4083 DUF4381
Other DBs
NCBI-ProteinID: QJC52216
UniProt: A0A6H2GYG2
LinkDB
Position
complement(2723382..2724923)
AA seq 513 aa
MDTIWWILIVLVVGAITFGIGYFVRKSFAEAKISSAEQAALQIVEQAKKEADAVKKETVL
EAKDEIHKLRSEADKDIRERRNENQRLERRLLQKEESLDKKIEALERKEELVANKEKRIE
ETQEQIDSIYRQQQSELERISGLTTEDAKTIIFNNVEQEVRHETAQMIKELEQQAKEEAD
KKARDIISLAIQRCAADHVAETTVSVVTLPNEEMKGRIIGREGRNIRALETLTGIDLIID
DTPEAVILSGFDPIRREIARTALEKLVADGRIHPARIEEMVEKSRREVDERIREYGEQAT
FEVGVHAIHPDLIKILGRLKYRTSYGQNVLKHSMEVAYLTGLMAAELGEDVTLAKRAGLL
HDIGKALDHEVEGSHVEIGVELARKYKEHPVVINSIASHHGDCEATSVIAMLVGAADALS
AARPGARRETLETYIKRLEKLEAISESFDGVEKSYAIQAGREVRVMVQPEKIDDTEAFRL
ARDITKKIEGELDYPGHIKVTVIRETRAVEYAK
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggacaccatctggtggatcttgatcgttctcgttgttggcgcgattacctttgggatt
ggttacttcgtccgaaagtcgtttgccgaggctaagatttccagtgccgagcaggccgcc
ctccagatcgtcgaacaggcgaaaaaggaagcggatgcggtgaaaaaagaaacggtgctg
gaagcgaaagacgaaatccataaactccgttcggaagcggacaaggacattcgggagaga
cgcaatgagaatcagcgtcttgaaaggcgcttgctgcaaaaagaggagtcgttggataag
aaaattgaggcactcgaacgcaaagaagaattggtagccaacaaggagaaacgaatcgag
gaaacgcaagagcagattgactccatctaccgtcagcagcagagcgagctggagcggatt
tccggcctgaccacagaggatgcgaagacgatcatcttcaacaacgtggagcaggaggtc
cgtcatgagacggcgcagatgatcaaggagctggagcagcaagccaaggaagaagcggac
aaaaaagcccgcgacatcatctccctggccatccagcgctgcgccgccgatcatgtcgcg
gaaacgacggtatccgtcgtgacgctgccgaacgaggagatgaagggccgcatcatcggc
cgcgagggccgcaacatccgcgcgctcgagacgcttaccggcatcgacctgattatcgac
gatacgccggaagcggtcatcttgtccggattcgatccgattcgtcgggagattgcccgc
acggcgctggagaagctggtcgccgacggcaggatccatcccgcccggatcgaggagatg
gtcgagaagtcccgccgcgaggtggacgagcggatccgcgaatacggcgagcaggcgacc
ttcgaggtcggggtgcatgcgatccacccggatctcatcaaaattctcggccgcctgaag
taccggacaagctatggccagaacgtgctgaagcactcgatggaggtcgcttatttgacc
ggcctgatggctgccgagctgggcgaggatgtcaccttggccaagcgtgccggcttgctg
catgatatcggcaaggcgctcgaccatgaagtcgagggctcccatgtcgagatcggcgtc
gagctggcccgcaagtacaaggagcatccggtcgtcatcaacagcatcgcgtcccatcat
ggcgactgcgaggcgacctcggtcatcgcgatgctcgtcggagctgcggacgcgctgtcc
gctgcccgtccgggagcgcgccgcgagacgctcgagacgtacatcaagcgtctggagaag
ctcgaggcgatctccgaatcgttcgacggcgtcgagaaatcgtacgccatccaggctggg
cgcgaggttcgcgtcatggttcagcccgagaagatcgacgatacggaagcgttccgcctg
gcgcgcgacatcaccaaaaagatcgaaggggagctggattatccgggacatatcaaggtc
acggtcatccgcgaaacccgtgcggtcgaatacgccaagtag

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