Paenibacillus albicereus: HGI30_13975
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Entry
HGI30_13975 CDS
T07921
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
palr
Paenibacillus albicereus
Brite
KEGG Orthology (KO) [BR:
palr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palr03400
]
HGI30_13975 (addA)
Enzymes [BR:
palr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HGI30_13975 (addA)
DNA repair and recombination proteins [BR:
palr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HGI30_13975 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
DEAD
AAA_16
ResIII
Motif
Other DBs
NCBI-ProteinID:
QJC54376
UniProt:
A0A6H2H4M6
LinkDB
All DBs
Position
complement(3128947..3132960)
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AA seq
1337 aa
AA seq
DB search
MPAAVNASVASAPKPAGSRWTDDQWAAVSARGGDVLVAAAAGSGKTAVLVERIIRMISED
ADVDQLLVATFTKAAAAEMKERIRAALEAALEREPDSEHLRRQLALLGRASITTLHSFCL
DVIRRYYPMIGLDPGFRVANETEGELLRLEVLDELFEERYAASDKDGGRFLELADRYGGE
KSDEPLYRLVQELHGFSRSQPWPDDWLRGMAAAFRVQEPSELEATPWLSALAADLRLSLD
GASAALSEALELAGAPGGPAAYADTLRDDLLLVSSVRESVLTRPWDEWRDAWQLAGSFGR
LKAARASDEADPLLQERAKELRAEAKGIVEELGKELFSRPAADYVRELRELAPLLETLAE
LVVEFDRRYRVAKRRKGLLDFGDLEHDCLAILRGEGSSPERAVPSAAALDYRRQFREVLL
DEYQDTNRVQEAIVELLTGTPADPPEQKGGRRFMVGDVKQSIYRFRLAEPDLFLAKYRRF
GRGDADEGRRIDLARNFRSRSEVVDGVNAVFRALMRESVAEMDYDRSAELVLGASYPEPE
PRDAFAVELALIDRERGAAASEAHAAGEGADGAEAGQREEAADLQTAQLEARYIARRLLD
LHAEGYGVHDGRGGTRPMAWRDVVILLRATKSWAPVLMEELQAAGIPAYAELGSGYFDAV
EVDVMLSALRVADNPFQDIPLAGILRSPMFGLTAEELALIRIVGGPGPYYEAVVRTADHL
LAPQELRAKLSAFLGSLDEWRDAARQGSLADLIWRIYSETGYYDWAGGLPAGAQRQANLR
ALHERARQFEAGTARGLFRFLRFMDRMRENGGDLGTAGALGEGEDVVRIMSIHKSKGLEF
PVVFVAGLGKKFNQQDVSSPFLLHKDLGFGPKFVDPELRLSYPTLPCLAIRRRMRMEMQA
EELRVLYVALTRPKEKLVLVGTVDDAVRQVERWNSSVGADGGLSDYRIAAARRFLDWLGP
LAGFASISGELQQASHAALSAPAGQSEETAKPGPSADPAPAAFPDAAARREASFSSWKTG
ILPYYVLGGQAAAGAEPAAAPDRTAERQAALHAVPLQPGGWEREVERRLSWRYPHAEASR
VAAKTSVTELKRLRGDAARGEDAVPMDSGPFVEPGGSLTARSGSAGAPSGAVPAAAPPPS
ASLGEEAALRLRRPKFMEQRGMTAADKGTAVHALLQHVPLDAPLPERAVEDTLARLVLKR
ILTEEQAESADVEAAKAFFAGPLGKRLLAADRVWRELPFSCLMPAREAFPDAGLEAAGEP
VLLQGVIDCLFEEAGRLVLCDFKSDRVPSGQFERAASRHRFQLGLYRRAVEQALGRRVAE
VQVYFLRGGQAVRLELD
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcggcggtgaacgcatcggtcgcatcggcgcccaagcccgcaggctcccgctgg
acggacgaccagtgggcggccgtatcggcccgcggaggggacgtgctcgtcgccgccgcg
gccggctccggcaagacggccgtgctcgtcgagcggatcatccgcatgatctccgaggat
gccgacgtcgaccagctgctcgtggcgacgttcaccaaggccgcggccgccgagatgaag
gagcggatccgggccgcgctggaagcggcgctcgagcgcgagccggattccgagcatctg
cgccgtcagctcgcgctgctcggacgggcgtcgatcacgacgctgcactcgttctgcctc
gacgtcatccgccgctattatccgatgatcgggctcgatccgggcttccgcgtcgcgaac
gagaccgagggcgagctgctgcggctggaagtgctggacgagctgttcgaggagcgctat
gcggcttcggacaaggacggcggccgcttcctggagctggccgaccgctacggcggggaa
aagagcgacgagccgctgtaccggctcgtccaggagctgcatggattttcccgctcgcag
ccgtggccggacgattggctgcgcggcatggcggccgccttccgcgtgcaggagccgtcc
gagctcgaggcgacgccgtggctgtcggctctcgccgccgatctgcgtctcagcctcgac
ggagcctccgctgccctgtccgaggcgctggagcttgccggggcgccgggagggccggcg
gcctatgcggacacgctccgggacgatctcctcctcgtctcgtccgtccgggagtcggtg
ctgacccgtccttgggacgagtggcgggacgcctggcagctggccggttcgttcggcagg
ctgaaggccgctcgcgcgtccgacgaagccgacccgctcctgcaggagcgggccaaggag
ctgcgcgccgaggccaagggcatcgtggaggagctgggcaaggagctgttcagccgtccc
gccgccgactacgtccgcgagctgcgcgagctcgctccgctgctcgagacgctggcggaa
ctcgtcgtcgagttcgaccggcgctaccgggtcgccaagcgccgcaaaggactgctcgac
ttcggcgacctcgagcacgattgcctggcgatcctgcgcggagaaggctcctcgccggag
cgtgccgtcccgtcggcggcagccttggattaccgcaggcagttccgcgaggtgctgctg
gacgaataccaggataccaatcgcgtgcaggaagcgatcgtcgagctgctgacgggcact
cccgcggatccgccggagcagaaaggcggacggcgcttcatggtcggcgacgtcaagcag
agcatctaccgcttccgcctggcggagccggacctgttcttggccaaataccgccgcttc
ggccgcggagatgcggacgaagggcgccgcatcgatctggcccgcaatttccgcagccgc
tccgaggtggtggacggcgtgaacgccgtcttccgcgcgctgatgcgggagtcggtcgcc
gagatggactacgaccgttccgccgagctcgtgctcggcgcttcctaccccgagccggag
ccgcgggatgcgttcgcggtcgagctcgcgctgatcgaccgcgagcgcggagcggcggcc
tcggaggctcacgccgcaggcgaaggcgcggacggcgccgaggccggccagcgggaggag
gcggccgacctgcagacggctcagctggaggcgcgctacatcgcccgccgcctgctggac
cttcatgccgagggatatggggtgcatgacgggcgcggcggcacccggccgatggcgtgg
cgggacgtcgtcatcctgctgcgagcgaccaagtcgtgggcgcccgtgctcatggaagag
ctgcaggcagccggcatcccggcctatgccgagctcggcagcggctacttcgacgccgtc
gaggtcgatgtcatgctgtcggcgctgcgcgtcgcggacaatccgtttcaagacattccg
ctcgccggcatcctccgctcgccgatgttcgggctgacggccgaagagctggcgctcatc
cgcatcgtcggcggcccggggccgtattacgaagcggtcgtccgtacggccgaccatctg
ctcgcgccgcaggagctgcgggccaagctgtcggcctttctcggctcgctcgacgaatgg
cgggatgcggcgcgccagggcagcctggcggatttgatctggcggatctacagcgagacg
ggttactatgattgggcaggcggattgccggccggagcgcagcgccaggccaacctgcgc
gcgctgcacgagcgggcccggcaattcgaggccggcaccgcgcgcgggctgttccgcttc
ctgcgcttcatggaccggatgcgcgagaacggcggcgacctcggtacggcgggagcgctc
ggcgagggcgaggacgtcgtgcgcatcatgagcatccacaagagcaaggggctggagttc
ccggtcgtcttcgtggcgggcctcggcaagaaattcaaccagcaggacgtcagctctcca
ttcctgctccacaaggatctcggcttcggcccgaagttcgtcgatcccgagctgcggctc
agctatccgacgctgccttgcctggcgatccgccgccggatgcggatggagatgcaggcg
gaggagctgagggtgctctacgtcgcgctgacgcggccgaaggaaaagctcgttcttgtc
ggcacggtcgacgacgccgtccgccaagtcgagcgctggaactcctccgtcggcgcggac
ggcggcttgtcggattaccggatcgccgccgcccgccgctttctcgactggctcggcccg
ctcgccggattcgcctcgatttcgggcgagctgcagcaagcctcgcatgcggctctatcc
gcgcctgcggggcagtccgaggagacagcgaagccgggtccgtctgccgacccggcgccc
gctgccttccctgatgcggccgcgcgtcgcgaagcctccttctccagctggaaaacgggc
atcctgccctactacgtcctgggcggccaagctgccgccggggcggagccggctgctgcg
cccgaccggacggcggagcggcaagccgcgctgcatgcggtgccgctccagccgggaggg
tgggaacgcgaggtggagaggaggctgtcctggcgctatccccatgccgaggcgtcccgt
gtcgcggccaaaacatccgtcaccgagctcaagcgccttcgcggcgatgccgccaggggc
gaggatgcggtgccgatggacagcggaccgttcgtcgagcctggaggaagcctgacggcc
cgcagcggttcagccggcgcgccttccggcgctgtacccgccgctgcgcccccgccatcc
gcttcgctaggcgaagaggccgcgctgcgcttgcggcggccgaagttcatggagcagcgc
ggcatgacggctgccgacaaaggcaccgccgtgcatgcgctgctgcagcatgtgccgttg
gacgcaccgctgccggaacgcgcggtcgaggatacgctggcgcggctcgtgctcaagcgc
atcctgacggaggagcaggccgagtccgccgacgtcgaggcggcgaaggcctttttcgcc
ggaccgctgggcaagcggctgcttgccgcggaccgcgtctggcgagagctcccgttcagc
tgcctgatgccggcgcgggaggcgttcccggacgccggcctggaggcggccggagagccg
gtgctcctgcaaggcgtcatcgactgcctgttcgaggaggccggccggctcgtgctgtgc
gatttcaagagcgaccgggtgccctccggccaattcgagcgggcggcgtccaggcatcgc
ttccagctggggctgtaccgccgggccgtcgagcaggcgctcggccgccgggtcgccgaa
gttcaggtctattttctccggggcggccaagcggtccgtctcgaactcgattaa
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