Paenibacillus albicereus: HGI30_14200
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Entry
HGI30_14200 CDS
T07921
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
palr
Paenibacillus albicereus
Pathway
palr03030
DNA replication
palr03430
Mismatch repair
palr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HGI30_14200 (holA)
03430 Mismatch repair
HGI30_14200 (holA)
03440 Homologous recombination
HGI30_14200 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palr03032
]
HGI30_14200 (holA)
03400 DNA repair and recombination proteins [BR:
palr03400
]
HGI30_14200 (holA)
Enzymes [BR:
palr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HGI30_14200 (holA)
DNA replication proteins [BR:
palr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HGI30_14200 (holA)
DNA repair and recombination proteins [BR:
palr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HGI30_14200 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DUF5876
Motif
Other DBs
NCBI-ProteinID:
QJC52602
UniProt:
A0A6H2GYY1
LinkDB
All DBs
Position
complement(3193176..3194222)
Genome browser
AA seq
348 aa
AA seq
DB search
MHAKDVGKDIKAGRIAPVYAAFGKDRYRMGQFASMLADKLLAPDERELGMVRFDTAETAL
EEIVAEAQTPPFFVPRKLIVVRDGAVLCAAAKENGKLEHKAERFLSYMEQPSETSVILFL
VQADKLDERRKIVKLLKERNLIVAFPELSEGELATWAVRRAADQKRVLGEDAAQLLVARL
GTGMQALAQEVDKLCLYAGEGGTVTQDDVARLTAATVEEDAFALVDAALERRMDRTLALY
RELLLRKEEPIRIAALVARQLRIMLQIKELERHRYSPQQMAGQLGLHPYAVKLAAEKARR
YDTAVLGRHLAALAELDYRMKTGQVDKELGLQLFFLSIGAQPAAAPLA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgaaggacgtggggaaggatatcaaggcggggcgcatcgcgccggtctacgcg
gcgttcggcaaggaccggtaccgcatggggcagttcgcttccatgcttgcggacaagctg
ctcgcgccggacgaaagggagctcggcatggtccgcttcgatacggcggagacggcgctg
gaggagatcgtggcggaggcccagacgccgccctttttcgtgccgcgcaagctgatcgtc
gtgcgggacggagccgtgctgtgcgcggctgccaaggagaacggcaagctggagcacaag
gccgagcggttcttgtcctatatggagcagccgtcggagacgagcgtcatcctgttcctc
gtgcaggcggacaagctcgacgagcgccgcaagatcgtgaagctgctcaaggagcgcaac
ctgatcgtcgcttttcccgagctgagcgagggagagctggcgacctgggcggtccggcgc
gccgccgaccagaagcgcgtgctcggggaggatgcggctcagctgctcgtcgcgcgcctc
gggaccggcatgcaggcgctggcgcaggaggtcgacaagctgtgcctgtacgcgggcgag
ggcggcacggtgacccaggacgacgtcgcccgcctgacggcggcaacggtcgaggaggat
gcgttcgcgctcgtcgacgcggcgctggagcggcgcatggaccgcacgctcgcgctctac
cgcgagctgctgctgcgcaaggaggagccgatccgcatcgcggcgcttgttgcccgccag
ctgcgcatcatgctgcagatcaaggagctggagcgtcaccgctactcgccgcagcagatg
gccgggcagctcggcctgcatccgtacgccgtcaagctcgcggccgaaaaggcgcgccgc
tacgatacggccgtgctcggccgtcatctggctgcgctcgcggagctggactaccggatg
aagaccggccaggtggacaaggagctcggcctgcagctgttcttcctgtcgataggagct
cagccggccgccgcgccgctggcttag
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