Paenibacillus albicereus: HGI30_19750
Help
Entry
HGI30_19750 CDS
T07921
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
palr
Paenibacillus albicereus
Brite
KEGG Orthology (KO) [BR:
palr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
palr03009
]
HGI30_19750 (rlmD)
Enzymes [BR:
palr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HGI30_19750 (rlmD)
Ribosome biogenesis [BR:
palr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HGI30_19750 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Methyltransf_15
TRM5-TYW2_MTfase
MTS
Cons_hypoth95
PrmA
Methyltransf_11
Methyltransf_23
Methyltransf_32
Methyltransf_12
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
QJC53548
UniProt:
A0A6H2H2I4
LinkDB
All DBs
Position
complement(4382397..4383980)
Genome browser
AA seq
527 aa
AA seq
DB search
MMKPTVPVGKNDTVTLDITGLTHEGEGVGRADGFTLFVQGALPGERVKAKVLKVKKTYGY
AKPIEWLQSSPDRVDAPCPIYKQCGGCQLQHFSYEAQLVWKRQHVVDTLERIGKLQVRGE
EAGTGAGARSSGDGDADRAVEATGTRFASEADGDRAVYARGKGLANEADADRATSGNGGI
IVHPTIGMDEPWRYRNKAQVPIGMAMADLENGAAGSLIGGFYARGSHRIVDMDACLIQHE
HNDEAVRQVKAIGNRVGISAYDEATGRGILRHVVVRTGFVTGEMMVVLVTNGPRIPRVED
WIAGIRETLPQVKSIVQNVNKRQTNVIFGDETRTLWGSDVIYDELDGIRFAISARSFYQV
NPAQTLRLYQSAVDYAGLTGRENVIDAYCGIGTISLFLARRAGHVYGVEIVPEAIEDAKR
NAELNGISNASFEAGPAEVVIPRWRSEGIRPDVIVVDPPRKGCDEQLLDTILAMQPERVV
YVSCNPATLARDLQVLEAGGYRTVEVQPVDMFPHTSHVESVCLLVKG
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacctaccgtaccggtcggaaaaaacgataccgtcacgctcgacatcaccggc
ctgacgcatgaaggcgagggcgtcggccgcgccgacggcttcaccttgttcgtgcaggga
gcgctgccgggcgagcgcgtgaaggccaaggtgctcaaggtcaaaaagacgtatggttac
gccaagccgatcgaatggctgcagagcagtccggaccgtgtcgacgctccgtgcccgatc
tacaagcaatgcggcggctgccagctgcagcacttcagctacgaggcgcagctcgtctgg
aagcggcagcatgtcgtcgatacgctggagcggatcggcaagctgcaggtgcggggcgag
gaagcagggacgggagcaggcgcgagaagctcaggcgacggggatgccgatcgagcggtc
gaagccacaggtacgagattcgcgagcgaagcggacggcgaccgagcggtttatgcgaga
ggcaagggactcgcgaacgaagcggatgccgatcgagcgacttctggcaacggcggcatc
atcgtccacccgacgattggcatggacgagccgtggcgctaccgcaacaaggcccaggtt
ccgatcggcatggcgatggcggacctggaaaacggcgcggccggcagcctgatcggcggc
ttctacgcccgcggctcgcaccgcatcgtcgacatggacgcctgcctcatccagcatgag
cataacgacgaggcggtgcggcaggtcaaggcgatcggcaaccgcgtcggcatctccgct
tatgatgaggcgaccgggcgcggcatcctgcgccatgtcgtcgtgcggaccggcttcgtc
accggcgagatgatggtcgtgctcgtcaccaacggcccgcgcatcccgcgcgtcgaggac
tggatcgcgggcatccgcgagacgctgccgcaggtgaagagcatcgtgcagaacgtcaac
aagcggcagacgaatgtcatcttcggcgacgagacgcgcacgctgtggggcagcgacgtt
atctacgacgagcttgacggcatccgcttcgccatctcggcgcggtcgttctaccaggtc
aacccggcgcagacgctgcgtctgtaccagtccgcggtcgactatgccggcctgaccggc
cgcgagaacgtcatcgacgcctactgcggcatcggcacgatctcgctgttcctggcccgc
cgggcgggacatgtgtacggcgtggagatcgtgccggaggcgatcgaggacgcgaagcgc
aacgccgagctgaacggcatcagcaacgcctcgttcgaggcgggaccggccgaggtcgtc
attcctcgctggcgctcggagggcatccgccccgatgtcatcgtcgtcgatcctccgcgc
aaaggctgcgatgagcagctgctcgacacgatcctggcgatgcaaccggagcgcgtcgtg
tacgtgtcctgcaacccggctacgctggcccgggatctgcaggttctggaggcgggcggg
tatcgcacggtggaggttcagccggtggatatgttcccgcatacgagtcatgtggagtcg
gtttgcttgttggtcaaaggatga
DBGET
integrated database retrieval system
