Paenibacillus albicereus: HGI30_22280
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Entry
HGI30_22280 CDS
T07921
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
palr
Paenibacillus albicereus
Pathway
palr02020
Two-component system
palr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
palr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HGI30_22280 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HGI30_22280 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palr03021
]
HGI30_22280 (rpoN)
Transcription machinery [BR:
palr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HGI30_22280 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF6471
HTH_17
Sigma70_r4
HTH_3
HTH_Tnp_4
HTH_IclR
HTH_Tnp_ISL3
LacI
HTH_23
MarR_2
HTH_38
LEM
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QJC53982
UniProt:
A0A6H2H2U1
LinkDB
All DBs
Position
complement(5000810..5002141)
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AA seq
443 aa
AA seq
DB search
MPGPVLQPQALLRQEQRQKLALTQQMRQSLALLALPAAELDRAVRELAADNPLLEIREPA
ASRRAGGRGDASAADPLERAAAAPPTLEAELLAQLRLSGAPAPQRRAAAWLAGNLDESGW
LALPLAEAAERLRLSAAEAESALRLLQSLQPAGIGARDLRECLLLQLDREPEPAPGAREL
AARWLPQLAARRWEEIAAGTGLGREQLELARQALLRLDPRPGQRLAGAAAIRTQAVVPDA
LVRIAADGELLVELAASWEPRLSLADTGSGPLAAVARGHEAYAYVEGCRRAARALIGGLA
QRRETLARVVRAVFEEQAAFLEGGWPALRPLTLADVALRLGVHESTVSRAVSGKHVRTPL
GTFPLKAFFSAALGRGGAAEEVSAAAAKQRLAELVAAECRERPLSDQQLAERLAELGIPL
SRRTVAKYRGELRIPSSSSRRGG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgccgggtcccgtcctgcagccccaggcgctgctccgccaggagcagcggcagaagctc
gcgctcacgcagcagatgcgccagtcgctggcgctgctcgcgctgcccgcggccgagctt
gaccgcgccgtgcgcgagctcgccgcggacaatccgctgctcgagatccgcgagcccgcg
gcctcgcgccgcgcgggcggccgcggcgacgcctcggccgccgacccgctcgagcgcgcc
gcagccgcgccgcccacgctcgaagccgagctgctcgcgcagctgcggctgagcggcgcg
cccgcgccgcagcgccgcgccgccgcctggctcgccggcaacctcgacgagagcggctgg
ctggcgctgccgctcgcggaagcggcggagcggctgcgcctatccgccgcagaggccgaa
tcggcgctgcggctgctgcagtcgctgcagccggccggcatcggcgcgcgggacctgcgc
gaatgcctgctgctgcagctggaccgggagccggagccggctcccggggcgcgcgagctc
gccgcgcgctggctgccccagctggcggcccgccgctgggaagagatcgcggccggcacc
ggccttggccgcgagcagctcgagctggcgcgccaagcgctgctgcgcctcgacccgcgg
cccggccagcggctggcgggcgcggcagcgatccggacgcaggcggtcgtgcccgacgcc
ctcgtccggatcgccgcagacggcgagctgctcgtcgagctggccgcctcctgggagccg
cggctgtcgctcgccgataccggctccggcccgctcgcggccgtcgcccgcggccacgag
gcttacgcctacgtggagggctgccgacgcgcggcgcgcgcgctcatcggcgggctggcg
cagcggcgggagacgctcgcgcgggtcgtgcgcgccgtcttcgaggagcaggccgccttc
ctggaaggcggctggccggcgctgcggccgctcacgctcgcggatgtggcgctgcgcctc
ggcgtgcacgaatcgaccgtgagccgcgccgtctccggcaagcatgtgcggacgccgctc
ggcacctttccgctgaaggcatttttcagcgccgcgctcggtcggggcggagcagcggag
gaggtgtcggccgccgccgccaagcagcggctcgccgagctcgtcgcggctgagtgccgc
gagcggccgctgtccgaccagcagctcgcggagcggctggcggagctcggcatcccgctg
tcgcggcgcaccgtcgccaagtatcggggcgagctgcgcatccccagctcctcctcgcgg
cggggcggctga
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