Paracoccus albus: PAF20_01770
Help
Entry
PAF20_01770 CDS
T09266
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pals
Paracoccus albus
Brite
KEGG Orthology (KO) [BR:
pals00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pals03032
]
PAF20_01770 (topA)
03400 DNA repair and recombination proteins [BR:
pals03400
]
PAF20_01770 (topA)
Enzymes [BR:
pals01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PAF20_01770 (topA)
DNA replication proteins [BR:
pals03032
]
Prokaryotic type
DNA Topoisomerases
PAF20_01770 (topA)
DNA repair and recombination proteins [BR:
pals03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PAF20_01770 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WBU60677
LinkDB
All DBs
Position
complement(345259..347898)
Genome browser
AA seq
879 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGDDYTVLASFGHVRDLPPKDGSVDPEADFDMRWEVASDSKK
HLKAIRDALSGDDALILATDPDREGEAISWHLLEALAPALKKGKSVSRVTFNAITKNAVT
DAMAKPREIDRDLVDAYLARRALDYLVGFNLSPVLWRKLPGAKSAGRVQSVTLRLIVERE
MEIEAFKPREYWSVHARLATPSGDEYDAQLVSLAGDKLERFDIPTAEKARLALSAIDARD
LTVSSVTAKPATRNPWPPFMTSTLQQEASRKLGLGARACMSTAQRLYEAGLITYMRTDGI
DMAPEAVMSARDVIKSRFGEQYLPKSPRMYKNKAKNAQEAHECIRPTDMSVAPDKLRISE
KDQRALYDLIWKRTLASQMEAARMERTTVEIASADGQVGLRANGQVMMFDGFLAVYDQGR
DDDDSEDSNRLPQISEGEPAKKIAAFAAEEGVLVDDSKTAAARQHFTQPPPRYTEATLVK
KMEELGIGRPSTYASIVTTIQDREYVRKDKNRLIPEDKGRLVTAFLVKYFPRYVSYDFTA
NLESELDDISSGNRAYLEVLRRFWRDFTAALDGTSDLRIGEVLESIDDALAPHLYPPRED
GGDPRECPLCHQGRLNLKTARSGGAFIGCSRYPECRFTRPLSAPDGEETVGDRVLGHDAG
DEISLKNGRFGPYVQRGEATEEIPKPPRASIPKGWDANAVDLEQALKLLALPRPVGNHPD
DGELVEAGIGRYGPYVKHGKKYANLPDVDEVFTIGMNRAVEVLAAKPTRGRATAAAPLKE
LGDHPDGGKIAVMNGRYGPYVKWEKINATLPRDLEPADVTVEKALELIAAKAAKSPKKGA
KKAAPKKTATKKTAKKTTAKKTTAKKAPAKKAAADKDAG
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgccagtcgtcgttgtcgaatcgccggccaaagccaagacgatcaacaaatatctgggc
gacgactataccgttctcgcatccttcgggcatgttcgcgacttgccgcccaaggacggt
tcggtcgatcccgaagccgatttcgatatgcgttgggaggtggcctcggattccaagaaa
cacctcaaggcgatccgcgacgcgctgtcgggcgacgacgcgctgatcctcgccaccgac
cccgaccgcgagggcgaggcgatttcgtggcacctgctggaagccctcgccccggccctg
aaaaagggcaaatcggtcagccgcgtgaccttcaacgcgatcaccaagaatgccgtgacc
gacgccatggccaagccgcgagagatcgaccgcgatctggttgatgcctatcttgcgcgg
cgtgcgttggattatctggtcggcttcaacctgtctccggtgctgtggcgcaagctgccc
ggcgcgaaatcggccgggcgcgtgcaatccgtcacgctgcgcctcatcgtcgagcgcgag
atggagatcgaggccttcaagccccgcgaatactggtccgtccacgcgcgtctggcgaca
ccttcgggcgatgaatacgacgcccagcttgtaagccttgccggggacaagcttgaacgt
ttcgacattccgaccgccgagaaggcgcggctggcgctttctgccatcgacgcccgcgac
ctgacggtcagcagcgtcaccgccaagcccgccacgcgcaacccgtggccgcccttcatg
acctcgacccttcagcaagaggcgtcgcgcaagctgggcctcggcgcgcgggcctgcatg
tccacggcgcagcggctgtatgaggccgggctgatcacctatatgcggaccgacgggatc
gacatggcccccgaagcggtgatgtccgcccgcgacgtcatcaaatcgcgtttcggcgag
caatacctgccgaaatcgccgcgcatgtacaagaacaaggcgaagaatgcgcaggaagcg
catgaatgtatccgcccgacggatatgtcggttgcgcctgacaagctgcgtatttccgaa
aaggatcagcgcgcgctgtatgacctgatctggaagcggacgctggccagccagatggaa
gccgcccggatggagcgcaccaccgtcgaaatcgccagcgccgacggacaggtcgggctg
cgcgccaatggtcaggtgatgatgttcgacggcttccttgccgtttacgatcagggccgc
gacgacgacgattccgaggacagcaaccgcttgccccagatcagcgaaggcgaaccggcc
aagaagatcgccgcgttcgccgccgaagaaggcgttctggtcgatgacagcaaaaccgcc
gccgcccgccagcatttcacccagcccccgccgcgctataccgaagcgactctggtcaag
aaaatggaggaactgggcatcgggcggccatcgacctatgccagcatcgtcaccacgatt
caggatcgcgaatacgtccgcaaggacaagaaccgcctgatccccgaggataagggccgg
ctggttacggcgtttctggtgaaatacttcccgcgctatgtctcttacgactttaccgcc
aatcttgaatcggaactcgatgacatctcctcgggcaaccgcgcctatctggaagtgttg
cggcgcttctggcgcgatttcaccgcggcactggatggcacatccgatctgcgcatcggc
gaggtgctggaatccatcgacgacgcgcttgccccgcacctgtacccaccccgcgaagac
gggggcgacccgcgcgaatgtccgctctgccatcagggacggcttaaccttaaaaccgcg
cgctctggcggggcgttcatcggttgctcgcgctatccggaatgccggtttacgcgcccc
ctctccgccccggatggcgaggaaaccgttggcgaccgggtcctgggccatgatgcgggc
gatgaaataagcctgaaaaatggccgctttggcccctatgtccagcggggggaggcgaca
gaagaaattccaaaaccaccccgcgccagtatcccgaaaggctgggacgccaatgcagtc
gatctggagcaggcgctgaaactgctggccctgccccgccccgtcggcaaccacccagat
gacggtgagttggtcgaggccgggatcgggcgctatggcccctatgtcaaacacggcaag
aaatatgccaacctgcctgacgtcgatgaggtgtttaccatcggcatgaaccgcgcggtc
gaggttctggcggccaagccgacgcgtggtcgtgcgacagcggctgcgccgttgaaagag
ttgggagaccatcccgatggcggtaagatagcggtgatgaatggtcgctacggcccctat
gtgaaatgggaaaagatcaacgccaccctgccgcgtgatctggagccggctgacgtcacc
gtggaaaaagctctggaactgattgcagccaaagcagccaagtcaccgaaaaagggcgcc
aagaaggccgcgccaaagaagacggccaccaaaaagacggcaaagaaaacgaccgccaag
aaaaccacggcaaagaaagcccctgcgaaaaaggcggcggccgacaaggatgccggctga
DBGET
integrated database retrieval system
