Paracoccus albus: PAF20_02285
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Entry
PAF20_02285 CDS
T09266
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pals
Paracoccus albus
Pathway
pals03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pals00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PAF20_02285 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pals03021
]
PAF20_02285 (rpoB)
03400 DNA repair and recombination proteins [BR:
pals03400
]
PAF20_02285 (rpoB)
Enzymes [BR:
pals01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PAF20_02285 (rpoB)
Transcription machinery [BR:
pals03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PAF20_02285 (rpoB)
DNA repair and recombination proteins [BR:
pals03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PAF20_02285 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
WBU60775
LinkDB
All DBs
Position
446116..450270
Genome browser
AA seq
1384 aa
AA seq
DB search
MAQSYVGQKRIRRGYGNIREVLEMPNLIEVQKSSYDLFLNSGDSDTHSDGEGIQGVFQSV
FPIKDFNETATLEFVKYELEKPKYDVEECQQRDMTYAAPLKVTLRLIVFDVDENTGAKSV
KDIKEQDVFMGDMPLMTQNGTFIVNGTERVVVSQMHRSPGVFFDHDRGKTHSSGKLLFAC
RIIPYRGSWLDFEFDAKDLVFARIDRRRKLPVTTLLYALGMDQEGIMDAFYDTVGFKLEK
GKKGAEGGWVTRFFPERMRGSRPAFDLVNAATGEVITKAGDKVTPRQVKQLLDGGKDIDL
LVPFDQIVGRFIAKDIVNDETGLIYAEAGDEITAEYDKDGELSGGLLKSLLDNDITDLPV
LDIDNVNVGAYIRNTMASDKNMNREGALMDIYRVMRPGEPPTVEAASAMFDSLFFDAERY
DLSAVGRVKMNMRLDLDAPDTQRTLRPEDIVACVRGLVELRDGKGEIDDIDHLGNRRVRS
VGELMENQYRVGLLRMERAIRERMSQTEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFM
DQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRMCPIETPEGQNIGLINSL
ATFARVNKYGFIETPYRKVVEGKVTDDVVYMSATEEMRHTVAQANAQLDDDGKFINELVS
TRQAGDFMLNPVDAVDLIDVSPKQLVSVAAALIPFLENDDANRALMGANMQRQAVPLLRA
EAPFVGTGMEATVARDSGAAIMARRGGIIDQVDAQRIVVRATENLGAGDAGVDIYRLRKF
KRSNQSSTINQRPLVKVGEKVVNGQVIADGPSTDQGELAIGRNVIVAFMPWNGYNYEDSV
LISERIHRDDVYTSIHIDEYEVAARDTKLGPEEITRDIPNVGEEALRNLDEAGIVYIGAE
VGPGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGAYGTIVEVRVFNR
HGVDKDERALQIEREEVERLSRDRDDELAILERNIYARLKTLISGKTAVKGPKGVKSNST
VDDELLGSISRGLWWQLAIGDEDTAKEVEALHDQFNAQKKALDNRFDDKVEKVRQGDDLP
PGVMKMVKVFVAVKRKLQAGDKMAGRHGNKGVVSKVVPIEDMPFLADGTAVDIVLNPLGV
PSRMNVGQILETHMGWAARGLGIKIDEALEAFRHGSGDMSGIREAMKNGYGDEMYAETFD
GMADEQLIEHAEAVRTGVPIATPVFDGAKEGDVDDALLRAGFDTSGQSIVFDGRTGEPFA
RPVTVGVKYYLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYG
AAYTLQEMLTVKSDDVAGRTKVYESIVKGEDNFEAGVPESFNVLVKEVRGLGLNMELLDA
EEEE
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtcatatgtcggccagaagcgcatccggcgcggctacggtaatatccgcgaa
gttctcgaaatgccgaacctcatcgaggttcagaaatcctcttacgacctgttcctgaac
tcgggcgacagcgatacccattccgatggagagggtattcagggcgttttccagtcggtc
ttcccgatcaaggatttcaacgagaccgcgacgctggaattcgtgaaatacgagctggaa
aagccgaaatacgacgttgaggagtgtcagcagcgcgacatgacctacgctgcgccgctg
aaggtgacgctgcggctgatcgtgtttgatgtcgatgaaaacaccggcgcgaaatcggtc
aaggacatcaaggaacaggacgttttcatgggcgatatgcccctgatgacgcagaacggt
acgttcatcgtgaacgggaccgagcgtgttgtcgtgtcccagatgcaccgctctcccggc
gtgttcttcgaccatgatcgcggaaagacgcacagctctggcaagctgctgttcgcctgc
cgcatcattccttaccgcggctcctggctggacttcgaattcgacgccaaggatctggta
ttcgcgcgtatcgaccgccgcaggaagctgccggtgacaacgctgctttatgcgcttggc
atggatcaggaaggcatcatggatgcattctatgataccgtcggcttcaagctggaaaaa
ggcaagaagggcgcagaaggcggctgggtcacgcgcttcttccccgagcgtatgcgcggc
tcgcgtccggcattcgatctggtgaatgcagcgactggtgaagtcatcaccaaggcaggc
gacaaggttaccccgcgtcaggtcaagcaactgctcgacggcggcaaggatatcgacctt
ctggttccgttcgatcagatcgtgggccgcttcatcgcgaaagacatcgtcaacgatgaa
accggtctgatctatgccgaagccggtgacgagatcacggctgaatacgacaaggacggc
gagctgtcgggtggcttgctgaagtcgctgctggacaatgacatcaccgacctgccggtg
ctggacatcgataacgtcaatgtcggcgcctatatccgcaacacgatggcgtcggacaag
aacatgaaccgcgaaggcgcgttgatggacatctaccgcgtcatgcgcccgggtgagccg
ccgaccgttgaagcggcctcggccatgttcgatagcttgttcttcgatgcagagcgttat
gatctgtccgccgttggccgggtcaagatgaacatgcgtcttgaccttgatgcgccggat
acgcagcgtacgttgcgcccggaagatatcgtggcctgtgtccgcggtctcgttgaactg
cgtgacggcaagggtgagatcgacgatatcgaccaccttggcaaccgccgcgtccgttcg
gtcggcgaattgatggagaaccagtatcgcgtcggcctgctgcgcatggagcgcgcgatc
cgtgagcggatgtcccagaccgagattgatacggtcatgccgcaggatctgatcaacgcc
aagccggcggcggccgcagtgcgggaattcttcggctcttcgcagctgtcgcagttcatg
gaccagacgaacccgctgtcggaagtcacgcataagcgccgtctctcggcgcttgggccg
ggcggtctgacccgcgagcgtgcgggctttgaagtccgcgacgtgcacccgacccattac
ggccggatgtgcccgatcgagacgccggaaggtcagaacatcggtctgatcaacagcctc
gcgaccttcgcgcgcgtcaacaaatacggcttcatcgaaaccccctaccgcaaggttgtc
gagggcaaggtcaccgacgacgtggtctatatgtccgcgaccgaggaaatgcgtcacacc
gtggcgcaggccaacgcgcaactcgacgatgacggcaagttcatcaatgagctggtcagc
acccgtcaggcgggtgacttcatgctgaacccggtcgacgccgtcgatctgatcgacgtg
tcgcccaagcagttggtttcggttgccgcagcactgatcccgttccttgaaaacgatgac
gccaaccgcgccctgatgggtgccaacatgcagcgccaggcagttccgcttctgcgggcc
gaagcgccgtttgtcggtaccggaatggaagcgaccgttgcccgcgattccggcgcagcg
atcatggcccgtcgcggcggtatcatcgaccaggtcgatgcgcagcgtattgttgtccgc
gcgactgagaaccttggggccggcgatgccggcgtggacatctatcgtctgcgcaagttc
aagcggtccaaccagtcctcgaccatcaaccagcgtccgctggtgaaagtgggtgagaag
gtcgtgaacggtcaggtcatcgctgacggtccctcgaccgatcagggggaactggccatc
ggtcggaacgtgatcgtcgcgttcatgccgtggaacggttacaactatgaggactcggtc
ctgatttccgagcggatccaccgcgacgacgtctatacctcgatccatatcgacgaatac
gaagtcgcggcccgtgataccaagttgggtccggaagaaatcacccgcgacatcccgaac
gtcggcgaagaggcgctgcgcaacctcgacgaggctggcatcgtctatatcggtgccgaa
gtcgggccgggtgacattcttgtcggtaagatcacgccgaagggcgaaagcccgatgacg
ccggaagaaaagcttcttcgcgccatcttcggtgaaaaggcgtccgatgtgcgcgacacc
tcgctgcgtctgccgcccggtgcttacgggaccatcgtcgaagtccgcgtcttcaaccgt
cacggcgtcgacaaggacgagcgtgcgctgcagatcgaacgtgaagaagtcgaacgcctg
tcgcgcgaccgcgatgacgagctggcgattctggagcgtaacatctatgcgcgcctgaaa
acgctgatctcgggcaagaccgccgtgaagggtccgaagggcgtcaagtcgaacagcacc
gtcgatgacgagttgctcggctcgatctcgcgcgggttgtggtggcagcttgccattggc
gacgaagacaccgcaaaggaagtcgaggcgctgcacgatcagttcaacgcgcagaagaaa
gcgctcgacaaccgtttcgacgacaaggtcgaaaaggtccgtcagggcgacgacctgcct
ccgggcgtgatgaagatggtcaaggtctttgttgccgtgaagcgcaagcttcaggccggc
gacaagatggctggtcgtcacggcaacaagggtgttgtgtccaaggtcgttccgatcgaa
gacatgccgttccttgctgacgggactgcggtcgacattgtgctgaacccgcttggcgtg
ccttcgcgtatgaatgtcggtcagattctggaaacccatatgggctgggccgcgcgcggt
ctggggatcaagatcgatgaggcactggaagccttccgtcacggttccggcgatatgtcc
ggcatccgcgaggccatgaagaacggttatggcgatgaaatgtacgccgaaaccttcgac
ggcatggcggatgagcaactgatcgagcatgccgaggccgtgcgcaccggtgtcccgatc
gcgactccggtctttgacggtgccaaggaaggcgacgtcgacgatgcgctgctgcgtgcc
ggttttgacacgtcgggtcagtccatcgtgtttgacggccgcacgggtgagcctttcgca
cgtcccgtcacggtcggtgtgaaatattacctgaagcttcaccacctggtcgacgacaag
atgcacgcgcgttcgaccggtccgtactcgctcgttacccagcagccgctgggtggtaag
gcgcagttcggtggtcagcgtctgggtgagatggaggtctgggcccttgaggcttacggc
gccgcctacaccctgcaggaaatgctgacggtgaagtcggatgacgtggcaggccggacc
aaggtctatgaaagcatcgtcaagggcgaggacaatttcgaggccggcgtgccggaatcg
ttcaacgttcttgtcaaagaggtccggggtctgggcctcaacatggaactcctggatgcg
gaggaggaagagtga
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