Paracoccus albus: PAF20_03960
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Entry
PAF20_03960 CDS
T09266
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pals
Paracoccus albus
Pathway
pals00300
Lysine biosynthesis
pals00470
D-Amino acid metabolism
pals01100
Metabolic pathways
pals01110
Biosynthesis of secondary metabolites
pals01120
Microbial metabolism in diverse environments
pals01230
Biosynthesis of amino acids
Module
pals_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pals00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PAF20_03960 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PAF20_03960 (dapF)
Enzymes [BR:
pals01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PAF20_03960 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
WBU61080
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Position
complement(792355..793170)
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AA seq
271 aa
AA seq
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MEHARTPGLPFMKMHGLGNDFVIIDLRHGVETPDAATIAAIADRNFGVGFDQLATIDHDE
AADARLVFFNNDGSRSAACGNATRCIARFLMEGSGKNHLQLRTDHAVLLAEDAGGGLTRV
NMGAPVLDWKSIPLAEDIDIDHLPIAGDPVATGMGNPHMTFFVEDVESVDLDRCGAEHEH
HPLYPERTNVEFVQILSSEEIKLRIWERGTGPTLASGSCSCAAAVAAARRGLTGRKVTVN
VPGGQLQIDWREDGVWMTGPTAHVFDGVWRG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggaacacgcccgcacccccggcctgcccttcatgaagatgcatgggctcggcaatgat
ttcgtcatcatcgaccttcgtcatggggtcgagacgcccgatgcggcgacaatcgcagcc
attgctgacaggaatttcggcgtcgggttcgatcaactcgccacaatcgaccacgacgaa
gcagcggatgcgcgcttggtgttctttaacaatgacggttcgcggtcggccgcctgcggg
aacgccacgcgctgtattgcgcggtttttgatggaaggctccggcaaaaatcacctgcaa
ttgcgcacggatcatgccgttctgctggccgaggatgcgggcggcggactgacccgggtc
aatatgggtgcgccagttctggattggaaatcgattccgctggcggaggatatcgatatt
gaccatctcccgatcgccggtgatcccgtcgcgaccgggatgggcaatccgcatatgacc
tttttcgttgaggacgtcgaatcagtcgaccttgatcgctgcggggcggagcacgagcat
catccgctgtaccccgaacgcacgaatgttgagttcgtgcagatcctgtcatccgaagaa
atcaagctgcgcatctgggaacgcgggaccgggccgacgctggcgtcgggctcgtgctcc
tgtgctgccgcggtcgcggccgcgcggcgtggccttacagggcgtaaggttacggtgaat
gtgccgggcgggcagttgcagatcgactggcgcgaggacggggtttggatgaccgggccg
accgcgcatgtctttgacggggtctggcggggatga
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