Paracoccus albus: PAF20_05425
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Entry
PAF20_05425 CDS
T09266
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pals
Paracoccus albus
Pathway
pals03410
Base excision repair
pals03430
Mismatch repair
pals03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pals00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PAF20_05425 (recJ)
03430 Mismatch repair
PAF20_05425 (recJ)
03440 Homologous recombination
PAF20_05425 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pals03400
]
PAF20_05425 (recJ)
DNA repair and recombination proteins [BR:
pals03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PAF20_05425 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PAF20_05425 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PAF20_05425 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
WBU61344
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Position
complement(1099716..1101464)
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AA seq
582 aa
AA seq
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MTDRAAFLNVENSLTGRRWVGPDQDTTRRAEALAQSADLPLPVARILAERGIEAAEADGY
LAPTLREMLPDPLSLRDMANAAERLVAATAAGEKIAIFADYDVDGGSSAALLLDWLRQQG
RDATLYIPDRIDEGYGPNAPAVAALAAEHDLIVCVDCGTLSHDALAAGGAADIVVLDHHL
AGETLPPALAVVNPNRQDEDGNLGHLCAAGVVFLTLVQAGRVLREQGKPEPPLLPLLDLV
ALATVADVAPLTGVNRAFVRQGLAIMARRQRPGLVALSDVSRVDTAPSSFHLGFMLGPRV
NAGGRVGRADLGARCLSATHPDEARRLAEELDELNRDRRAIEASVREEALSQVEARADQA
LSWAAGDGWHPGVVGIVAARVKERTGLPSVVIGIENGIGKGSARSVAGVDLGRAVHRLSS
EGLIEKGGGHTMAAGLTVAESMIEGAMARLAELIQPELHNRTGTDDLRISGLLEPAAATP
ELMEMIESAGPFGQAAPAPRYAFSDLLLDSVATMGDGHLRAAFRVPGQKPLEAVAWGAMQ
SPLGPALLSAKGRRFHIAGKLELSHWGGRTRVRLRLDDAFAL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccgcgctgcttttctgaatgtcgagaactctctgacgggccgtcgatgggtc
ggcccggatcaggacaccacccgccgtgccgaggcattggcgcaatcggctgacctgccc
ctgcccgtcgcccgcatccttgcagagcgtggcatcgaagccgccgaggccgatggatac
cttgcgccgacattacgcgagatgctgcccgacccgctgagcctgcgcgacatggccaac
gcagccgagcgtctggttgcggccacagcggcaggcgaaaaaatcgcgatcttcgcggat
tacgatgtcgatggcggttcttccgccgcgttgctgctggactggctgcgccagcagggc
cgggacgcgacgctttatatcccggaccgcattgacgaaggctatggccccaacgcgccc
gccgttgcagcacttgctgccgagcatgatctgatcgtctgcgtggattgcggcacactg
tcccatgacgcgctcgcggcaggcggtgcagcagatatcgtcgttctggatcaccatctt
gccggcgagacgctgcccccggcgcttgccgtggtaaatcccaaccgacaggatgaggat
ggcaatctgggccatctctgcgcggcgggtgtcgtgttcctcacattggttcaggcgggg
cgcgtgctgcgtgaacagggcaagcccgaaccacctctgcttccgctgcttgacctcgtc
gccctggcgacggtcgcggatgttgcaccgctgacgggggtcaaccgcgctttcgtgcga
cagggcctcgcgatcatggcgcggcgtcagcggccgggcctggtcgcgctgtcagatgtc
tcgcgcgtcgacaccgcaccaagcagttttcaccttggctttatgctgggtccgcgcgtg
aatgcaggtggccgcgtcggccgggccgatctgggcgcccgctgcctgtcggccacccat
cccgatgaggcaaggcgcctggccgaagaactggacgaactcaaccgcgaccgccgcgcg
atagaagcatcggtccgcgaggaggcgctgtcacaagttgaagcccgagccgaccaggcg
ctgagttgggctgccggtgatggctggcaccccggcgtcgtcggtatcgtcgcggcgcgc
gtgaaagagcgtacgggcctgccctctgtcgtgatcgggatcgaaaacggtatcggcaaa
ggctccgcccggtctgttgccggggtcgatcttggccgcgcggttcatcgtctttcgtca
gagggcctgatcgagaaaggcggagggcacacgatggccgcgggcctgacagtcgccgaa
tcgatgatcgagggtgcaatggcccggctggcggaactgatccagccagagcttcacaac
cggaccggcactgatgatctgcggatctctggcctgctggaaccggcagcggccacaccc
gagctgatggaaatgatcgaatcggcgggaccattcggtcaggcggcccctgctccgcgc
tatgcgttttccgacctgctactcgacagcgtggcgacaatgggcgacggccacctgcgc
gcggctttccgggtgccgggccagaaaccgctggaggctgtcgcatggggtgcaatgcaa
tcgccgctgggtcctgccctgctgtccgcaaagggacgacgctttcacatcgcaggcaaa
ctggagctgtcgcattggggcggtcgcacccgtgtccgcctgcgcctggacgacgctttc
gccctgtag
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