Paracoccus albus: PAF20_17440
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Entry
PAF20_17440 CDS
T09266
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pals
Paracoccus albus
Brite
KEGG Orthology (KO) [BR:
pals00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pals03032
]
PAF20_17440
03400 DNA repair and recombination proteins [BR:
pals03400
]
PAF20_17440
Enzymes [BR:
pals01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PAF20_17440
DNA replication proteins [BR:
pals03032
]
Prokaryotic type
DNA Topoisomerases
PAF20_17440
DNA repair and recombination proteins [BR:
pals03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PAF20_17440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
AsnC_trans_reg_3
Motif
Other DBs
NCBI-ProteinID:
WBU62060
LinkDB
All DBs
Position
p1:complement(164269..165333)
Genome browser
AA seq
354 aa
AA seq
DB search
MPKDTRPAIVDPEDAAESVGLIYVSDDSPGISRARSGKGFSYRGSNGQTITDKRRRARLN
ALAIPPAWQDVWICPDPRGHLQATGRDARGRKQYRYHPDFREVRDGAKYDHMLQFATALP
KIRQQVHKDLGRRGLPAEKVLATVVWLLENTMIRVGNTDYARSNKSHGLTTLRDRHVDID
GSKIRFKFKGKGGKDWDLGITDRRVAKIVQSVQDLPGQHLFQYEDEDGDRQQVSSTEVND
YLRDISGSEVTAKDFRTWTGTVLAAIALAEYEKADSESAAKANVRDAIESVAAHLGNTPA
ICRKCYVHPQIIDAYMADELKLELRDKIEKKLKKPGLRHEEKQVLKFLEERLKT
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggacacaagacctgcaattgttgaccccgaagacgcagccgaaagtgtgggg
ttgatctatgtcagcgatgattcacctggcatcagccgtgcccgatccggcaagggtttc
agctatcgcggcagcaatggtcagacgatcaccgacaaaaggcggcgcgcgcgtctcaat
gcgctcgccattccgccagcttggcaggatgtgtggatctgtcccgatccgcgcgggcat
ttgcaggctactggccgtgacgcgagggggagaaagcaatatcgctatcaccccgatttc
cgagaggtccgtgatggcgcgaaatatgaccacatgctgcaattcgccacagcgctgccg
aagatccgtcaacaggttcacaaggatctggggcgtcgcggcctgccagcggaaaaggtg
ctggcaactgttgtctggcttctggaaaacaccatgatacgcgtgggtaataccgactat
gcacgaagcaacaaatctcatggtttgaccacgttgcgcgaccggcatgtcgatatagac
ggcagcaagatcagattcaaattcaagggcaaaggcgggaaggattgggatctgggaatc
actgaccgccgcgtggcaaagatcgtgcaatcggtgcaggatctcccgggtcagcacctt
tttcaatacgaggacgaagacggcgaccggcaacaggtatcttcaaccgaggtgaacgac
tatctgcgagatatttcgggcagcgaagtgaccgccaaggactttcgcacctggaccgga
accgttctggctgcgattgctctggctgaatatgaaaaggcggatagtgaatccgccgcc
aaggccaatgtccgcgatgcgattgaatcggtggccgcccatctgggcaatacgcccgca
atctgtcgcaagtgctacgttcatccgcagattatcgatgcctatatggcggatgagctg
aaacttgaattgcgtgataagatcgaaaagaagctgaagaagcccggacttcggcacgag
gaaaaacaggttctgaaattccttgaggaaaggttgaaaacatga
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