Pantoea allii: ACRPH8_15670
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Entry
ACRPH8_15670 CDS
T11704
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
palt Pantoea allii
Pathway
palt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
palt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACRPH8_15670 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palt03400
]
ACRPH8_15670 (uvrB)
DNA repair and recombination proteins [BR:
palt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACRPH8_15670 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACRPH8_15670 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
SBDS_domain_II
AAA_22
DUF8810
DUF87
Motif
Other DBs
NCBI-ProteinID:
XUW19643
LinkDB
All DBs
Position
complement(3328523..3330544)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKDFKLNSAFKPSGDQPEAIRRLEAGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEFFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTRGMIIDQRSILRRLSELQ
YTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGQVESVVPR
FTIYPKTHYVTPRERILQAMEDIKVELADRRKNLLENNKLLEEQRITQRTQFDLEMMGEL
GYCSGIENYSRYLSGRGPGEAPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGKYELEKSGDEVIDQVVRPTGLLD
PILEVRPVATQVDDLLSEIRKRVTVNERVLVTVLTKRMAEDLTEYLEEHGEKVRYLHSDI
DTVERMEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITPSMARAIEETDRRREKQQRHNEENGIVPQGLNKKITDILELG
NNVVKTRGKAKPSKRGAAESNADYLALSPQALQKKIHELEGQMQQHAQNLEFEQAAGLRD
QLQELRTLFIAVS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagattttaaactgaactccgctttcaagccttctggcgatcagccggaagcg
attcgtcgtctggaagccggactggaagatggactggcgcaccagacgttattaggcgtc
accggatcgggtaaaacctttaccgtcgctaacgtaatcgccgatctcaatcggcccacc
atggtattagcgcccaacaaaaccctggcggcgcagctgtatggtgagatgaaagagttc
tttccggacaacgccgtggagttttttgtctcctactacgattactaccagcctgaagcc
tatgtgccgagttccgacacctttatcgaaaaggatgcctcggttaacgaacacattgag
caaatgcgtctttccgccacaaaagccttgctggagcggcgcgatgttatcgtcgtcgca
tcggtgtcggcgatttatggtctgggcgatcccgatctttatctgaaaatgatgctgcac
ttaacgcgcggcatgatcatcgatcaacgcagcatcctgcgccgcctgtcagagctgcag
tacacccgcaacgatcaggcgttccagcgcggaaccttccgggtgcgcggcgaggttatc
gatgtgttccctgcggaatccgacgacattgcgctacggatcgaattatttgatgaagag
gtggagcgcctgtcactgtttgacccgctcactggccaggttgagtcagtggtgccgcgc
tttacgatctatcctaagacgcactatgtcacaccgcgtgagcgcattttacaggccatg
gaagacatcaaagtcgagctggccgaccggcgtaaaaacctgctggaaaataacaaactg
ctggaagagcagcgtatcacccagcgtacccagtttgatctggagatgatgggggagctg
ggctactgctccggcatcgaaaactactcgcgttacctttcgggccgcgggcctggagaa
gcgccgccgaccctgtttgactatcttccggcggatggcctgctggtggtggatgagtcc
cacgtgacgattccgcaaattggcggcatgtaccgtggtgaccgggcgcgtaaagagaca
ttggtggaatacggtttccgtctgccctcggcgctggataaccgcccaatgaagtttgaa
gagttcgaggcactggcaccgcaaacgatttatgtgtcggcgacgccgggcaaatacgag
ctggaaaaatccggcgacgaggtgattgaccaggtggtgcgaccgaccggcctgctggac
ccgatcctcgaagtgcggcccgtcgcgacccaggttgacgatctgctgtcagagatccgc
aaacgcgtcaccgtcaatgaacgcgtactggttaccgtcctgaccaaacgcatggcggaa
gacctgaccgagtacctggaagagcacggcgaaaaagtgcgctatctgcactcggatatt
gataccgtggagcgaatggaaatcatccgtgacctgcgtctgggtaaatttgacgtattg
gtggggattaacctgttgcgagaagggctggatatgcccgaagtgtcgctggtagcgatt
ctggatgcggacaaagagggcttcctgcgttcggaacgctcgctgattcagaccattggt
cgtgcggcgcgtaacatcaacggtaaagcgattctctacggcgataaaatcacgccttca
atggcgagagcgattgaagaaaccgatcgccgccgtgaaaagcagcagcgccacaatgaa
gaaaacggcattgtgccgcagggcctgaataagaaaatcaccgatatcctggaactgggc
aataacgtggtgaaaacccgcggcaaagccaaacccagcaaacgcggtgcggccgaaagc
aacgccgattacctggcgttatcgccgcaggcattgcagaaaaagattcacgagctggaa
gggcagatgcagcaacatgcgcaaaacctggagttcgaacaggcggctggcctgcgcgat
caactgcaagaattgcgcacgttatttattgcggtgtcgtaa
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