Pseudoglutamicibacter albus: CJ193_001425
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Entry
CJ193_001425 CDS
T09091
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
palu
Pseudoglutamicibacter albus
Pathway
palu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
palu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CJ193_001425 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palu03400
]
CJ193_001425 (uvrB)
DNA repair and recombination proteins [BR:
palu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CJ193_001425 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CJ193_001425 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_16
AAA_22
AAA_5
nSTAND3
UB2H
DUF815
HEM4
DUF87
AIG1
Motif
Other DBs
NCBI-ProteinID:
WIK84556
LinkDB
All DBs
Position
complement(320884..322974)
Genome browser
AA seq
696 aa
AA seq
DB search
MSLAQKIDRVVHPFEVVSEFEPAGDQPQAIAELKQRIEGGEKDVVLLGATGTGKSATAAW
LIEAVQRPTLVLVQNKTLAAQLANELRHLLPNNAVEYFVSYYDYYQPEAYVPQTDTFIEK
DSSINEEVERLRHSATNALLTRRDCVVVSTVSCIYGLGTPEEYIKQMVTLKVGQELDRDQ
MLRQFVQMQYTRNDVDFHRGTFRVRGDTVEIIPMYEELAVRVEFFGDEIESIQTLNPITG
DVVRDENEMYIFPASHYVAGDDRMHQAIGTIEDELRERLQELESQNKLVEAQRLRMRTTY
DLEMMQQMGFCNGIENYSRHIDGREAGSAPHCLLDYFPDDFLLIIDESHVTVPQIGGMYE
GDMSRKRTLVEHGFRLPSAMDNRPLKWDEFLERIGQTVYLSATPGKYELSQADGYVEQII
RPTGLVDPKITVKPTKGQIDDLLGEINERVARNERVLVTTLTKRMAEDLTDYLAENGVKV
EYLHSDVDTLRRVELLTELRMGTFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSTT
SLIQTIGRAARNVNGEVHMYADTMTDSMKQAIEETERRREIQIAHNEKHGITPAPLKKKI
ADITEQLAREDADTNELLSNFDYGAGHRGYNALQDDKKTDTRGTIAAPSEDLATLIAQLS
EQMHAAAADLQFELAARLRDEVADLKKELRAMKSAE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttggcgcagaaaattgatcgtgtcgtccacccgttcgaggtggtttctgaattc
gagcctgcaggggatcagccgcaagcgattgcggagctcaagcagcgcatcgaaggtggg
gagaaggacgtcgtcctgctgggcgcgaccggtaccggtaagtccgctaccgcggcgtgg
ctcatcgaagccgtgcaacgcccgacgctcgtcctggttcagaacaagacgcttgccgcg
cagctcgccaacgagctacggcacctgttgccgaacaacgcggtcgaatacttcgtctcg
tactacgactactaccagcctgaggcgtacgtgcctcagaccgatacgttcatcgagaaa
gactcctcgatcaacgaggaagtcgagcggctgcgtcactccgcaaccaacgcgctgctg
acccgccgcgactgcgtcgtcgtatccaccgtctcctgcatctacggcctcggtacccct
gaggaatacatcaagcagatggtgacgctcaaggtcggccaggagctggaccgcgaccag
atgctgcgccagttcgtgcagatgcagtacacgcgcaacgacgtggacttccaccgcgga
acgttccgcgtacgcggagatacggttgagatcatcccgatgtacgaagagcttgcggtg
cgcgtcgagttcttcggcgacgagatcgaatcgatccagaccctgaacccgatcacgggc
gatgtggtgcgcgacgaaaacgaaatgtacatcttcccggcctctcactatgtggccggc
gatgaccgcatgcaccaggccatcggaaccatcgaggatgagctgcgtgagcgtctgcaa
gagctagagagccaaaacaagcttgttgaagcccagcgtttgcggatgcgcacgacctac
gacctcgaaatgatgcagcagatgggcttctgcaacggcatcgagaactattcacgccac
atcgacggccgtgaagccggttctgcgccgcactgcttgctggattacttcccggacgac
ttcctgctcatcatcgacgagtcccacgtgactgtcccacagatcggcggaatgtacgaa
ggtgacatgtcccgcaagcggaccctcgttgagcacggcttccgcctgccgtcagcaatg
gacaaccgtcccctcaagtgggacgagttcctcgaacgcatcggccagaccgtctacttg
tccgcaaccccaggcaaatatgagctgtcccaggccgacggttacgtcgaacagatcatt
cgcccaaccggcttggtcgacccgaagatcaccgtcaaaccaaccaagggccagatcgat
gacctgctcggggagatcaacgaacgcgtcgcccgcaacgaacgcgtgctcgtcacgacg
ctgaccaagcggatggccgaagacctcaccgactacctcgccgaaaacggggtcaaagtc
gaatacctccactccgacgtcgatacgctacgccgcgtcgagctactcaccgagctacgc
atgggtaccttcgatgtgctcgtcggcatcaacctgctccgtgagggcctcgacctccct
gaagtctcgctcgtcgcgatcctggatgcggacaaggaaggcttcctacgctcaacgacc
tcgctcatccagaccatcggccgcgccgcacgaaacgtcaacggcgaagtacacatgtac
gccgacaccatgacggactcgatgaagcaagcgatcgaagagaccgaacgccgccgcgaa
atccagatagcgcacaacgagaaacacgggatcaccccagcaccgctcaaaaagaagatc
gcggacatcaccgaacagctcgcacgcgaagacgccgacaccaacgaactactcagcaat
ttcgactacggcgccggccaccgcggctacaacgccctacaagacgacaagaagaccgat
acgcgcggcaccatcgccgcaccgagcgaagacctcgcaacgctcatcgcgcaactctcc
gaacagatgcacgcggcagccgctgaccttcaattcgaacttgccgcacgattgcgtgac
gaagtcgcagacctcaagaaggaattgcgcgccatgaaatcagcggaataa
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