Pseudoglutamicibacter albus: CJ193_001510
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Entry
CJ193_001510 CDS
T09091
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
palu
Pseudoglutamicibacter albus
Pathway
palu03030
DNA replication
palu03410
Base excision repair
palu03420
Nucleotide excision repair
palu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJ193_001510 (polA)
03410 Base excision repair
CJ193_001510 (polA)
03420 Nucleotide excision repair
CJ193_001510 (polA)
03440 Homologous recombination
CJ193_001510 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palu03032
]
CJ193_001510 (polA)
03400 DNA repair and recombination proteins [BR:
palu03400
]
CJ193_001510 (polA)
Enzymes [BR:
palu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJ193_001510 (polA)
DNA replication proteins [BR:
palu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CJ193_001510 (polA)
DNA repair and recombination proteins [BR:
palu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CJ193_001510 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CJ193_001510 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WIK84573
LinkDB
All DBs
Position
complement(340306..343071)
Genome browser
AA seq
921 aa
AA seq
DB search
MSVNAKSSSSASSSSSESKPRLLVIDGHSMAFRAFFALPAENFSTATGQYTNAVHGFVSM
LLKMIEQREPTHVAVAFDLSGPTIRSQQYEEYKGGRAETPPEFAGQIELIDQVMAAMNIP
TLTYEGYEADDILATLSTRGAADGFEVLVVSGDRDTFQLINDDVLVLYPMRGISDIPPMD
AAAVEERYGVLPQNYPDMAALVGEKADNLPGVPGVGNKTAAKWINLYGSVEDILAHANEI
KGKVGQNLRDHVDDVRRNRELNALVRDLDVDVTWDDMRVREPEWDRIEDLFDSLEFNTLR
RRLNDVMGGLSEDEGPAVELPNAVSATSAKDIREWLDGVAAPDAVAGSVAALRAELAAEH
AVGEASDVLSISVAVLPEDSAQAEVLQVDLAQLDEEATDVVAGWLADAERPKVVYDLKPM
LKALWARGLKVAGVIDDVALSAYLVQPDRRGYALEDLAQQHLKRTLGEAAAQEAGQLDLG
LDEDGSAVDGREAERADVTLRLHTVLQPMLVDREAEDLLTQVEVPLASVLADMEATGVAV
DLDALDDLIDSFTQNMNRAQQQAFDAIGHEVNLSSPKQLQTVLFEELELPKTKKIKTGYT
TDAASLQDLLVKTGHPFLEALMAHRDVSKLRQTVEGLKKTVAVDGRIHTTFSQTAAATGR
LSSLNPNLQNIPVRTEEGRRIRDIFTCGDSAELLTADYSQIEMRIMAHLSGDEALIQAFK
DGEDLHRFVGSRVFDVAPEDVSPEMRSKVKAMSYGLAYGLSQFGLSQQLGISVDEARTLR
NDYFKRFGAVRDYLDEVVDQARVDGYTSTLLGRRRYLPELHSDNRQLREMAKRAALNAPI
QGTAADIIKLAMLRIPAAFEDAGLESKMLLQVHDELIFEVVDGEQDKVRSLVVEIMSGAM
ELSVPLDVNIGTGRTWHDAAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgtcaacgcaaagtcttcatcgtctgcatcttcgtcgtcttctgaatctaagcca
cgtctgctcgttatcgatgggcattcgatggcgttccgcgcgtttttcgctttgcctgcg
gagaatttctctacggctacgggccagtacacgaacgcggtgcacggtttcgtttcgatg
ctgctgaaaatgattgagcagcgggagccgacccacgttgcggtcgcgtttgacctttcc
ggccctacgatccgttcgcaacagtatgaggaatacaagggcggccgagctgagacgccg
ccagagttcgcgggccagattgagctgatagatcaggtcatggccgcgatgaacattccg
acgctcacgtacgaaggctacgaggcagacgacattttagcgacactctcgacccgtggc
gccgcggacggctttgaggttctggtggtttcgggtgaccgcgatacgttccagctgatc
aacgacgacgtgctcgttttgtacccgatgcgcggcatttcggatatcccgccgatggac
gccgcagctgttgaagagcgttacggtgttctgccccagaactacccggacatggctgcg
ctggtgggggagaaggccgataatcttccgggtgttcctggcgtgggtaataagaccgcg
gctaagtggatcaacctgtatggctcggttgaggacatccttgctcatgccaatgagatc
aagggcaaggtcggccagaacctgcgtgatcacgtcgatgacgtgcgccgcaaccgtgag
ctgaacgctctggttcgggatttggatgtggatgtcacgtgggatgacatgcgggtgcgt
gaacctgagtgggaccgcatcgaggacctgtttgattcgcttgagttcaatacgttgcgt
cgtcgtctgaacgatgtgatgggtggcttgagcgaggacgaggggccggctgttgagttg
ccgaacgcggtttcggcgacgtctgcgaaagatattcgtgagtggcttgacggggtggcc
gcgcccgatgctgtggccggttctgtcgctgcgttgcgtgcggagctcgcggctgagcat
gcggtgggcgaggcatcggatgttctgagcatttcggttgctgtgcttccggaagactcg
gcgcaggctgaggttttgcaggttgatcttgctcagttggatgaggaagctaccgatgtg
gtcgcgggctggctggccgatgctgagcgtccgaaggtggtctatgacctcaagccgatg
ttgaaggcgttgtgggcgcgtgggttgaaggtcgcgggcgtcatcgatgatgttgcgttg
tctgcgtatttggttcagccggatcgccgcggatatgcgcttgaggatcttgctcagcag
catctgaagcgcacgctgggcgaggccgcggcgcaagaagccggccagcttgatctgggc
ctggacgaagacggttccgccgtcgacggccgtgaggctgagcgcgcggatgtcacgttg
cgtttgcacacggttttgcagccgatgctggtggaccgtgaggctgaggacttgctgact
caggtcgaggttccgttggcgagcgttttggcggacatggaggccacgggtgtggccgtg
gatctggatgcgctcgatgacttgatcgacagcttcacccagaacatgaaccgcgctcag
cagcaggcgttcgatgccatagggcacgaggtcaacctcagtagccctaagcagttgcag
acggttttgttcgaggaactcgagcttccgaagaccaagaagatcaagaccggttacacg
acggatgcggcttcacttcaggatctgctggtcaagacggggcatccgttccttgaggct
ctgatggcccaccgtgacgtgagcaagctgcgccagaccgtcgaaggtttgaagaagacc
gttgcggtcgatggccgtattcacacgacgttctcgcagactgccgcggcgactggccga
ttgtcatcgctgaatccgaacctgcagaacatcccggttcgtaccgaggaaggccgccgc
atccgcgacatcttcacgtgcggcgacagcgctgaactgttgacggcggactattcgcag
attgagatgcgcatcatggcgcacctctccggcgatgaggcgttgatccaggcgttcaag
gacggcgaggatctgcaccgttttgtgggttcccgggtcttcgacgtcgcgcctgaggat
gtttcgcctgagatgcgttccaaggtgaaggcgatgagctacggcctcgcatatggcctg
agccaattcggtttgtcccagcagctcggcatttcagtggatgaggcccgcacgctgcgt
aacgactacttcaagcgtttcggtgcggtccgcgattacctcgacgaggttgtcgaccag
gcgcgagtggatggctacacctcaacgttgctgggccgccgtcgctatcttcctgagctg
catagcgataaccgccagttgcgcgagatggctaagcgtgccgccctgaacgcaccgatc
caggggaccgccgcggacatcatcaagctcgcgatgctccggattcctgccgcattcgag
gatgcgggcctggaatcgaagatgctgctgcaggtccatgacgaattgattttcgaggtc
gtggacggcgaacaagacaaggtgcgttcgctcgtggtcgagatcatgtccggcgcgatg
gaactgtctgttccgctggatgtgaacatcggtacgggccgtacctggcacgacgccgcg
cactag
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