Pseudoglutamicibacter albus: CJ193_002340
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Entry
CJ193_002340 CDS
T09091
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
palu
Pseudoglutamicibacter albus
Pathway
palu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJ193_002340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palu03019
]
CJ193_002340
03016 Transfer RNA biogenesis [BR:
palu03016
]
CJ193_002340
Enzymes [BR:
palu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CJ193_002340
Messenger RNA biogenesis [BR:
palu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CJ193_002340
Transfer RNA biogenesis [BR:
palu03016
]
Prokaryotic type
tRNA degradation factors
CJ193_002340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
S1_RRP5
KH_2
Ribosomal_L9_C
KH_KhpA-B
Importin_rep_6
Motif
Other DBs
NCBI-ProteinID:
WIK84711
LinkDB
All DBs
Position
complement(510060..512288)
Genome browser
AA seq
742 aa
AA seq
DB search
MEATDIQYSEAVIDNGRFGKRTIRFETGHVAKQAAGSAMVFLDDDTSMLSATTAGKHPRE
GFDFFPLTVDVEERMYAAGKIPGSFFRREGRPSTEAILACRLMDRPLRPSFVKGLRNEVQ
IVVMVTSINPEDYYDVVAINASSMSTQLSGLPFSGPIGGVRIALIDDGEGAQWVAFPTKS
QLDDAVFNMVVAGRVAGDDVAIMMVEAGATDHAWDLIHGRGVTAPTETVVAEGLEAAKPF
IRALVEAQADLASRAAKPAREFPIFLDFEDDAYEAVEKLASAKLADVYQIADKQERQDAD
DALKEEVLEELAGEGKEFEERASEISKAYGAVTKHIVRQRILKDQVRIDGRGLTDIRQLL
AEVEVLPRVHGSAIFERGETQIMGVTTLNMLKMEQQIDSLAPEKAKRYMHHYNFPPFSTG
ETGRVGSPKRREIGHGALAERALVPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTL
SMYNAGVPLKAPVAGIAMGLVTDTVDGETRYAALTDILGAEDAMGDMDFKVAGTRDFITA
IQLDTKLDGIPASVLAAALKQAHEARVHILDVMDSAIDSPDEMSPYAPRIISLKIPVDKI
GEVIGPKGKMINQIQEDTGAEISIEDDGTVLIGATDGAAAEAARATINAMANPQIPEVGE
RYLGTVVKLTSFGAFISLTPGKDGLLHISELRKLNGGQRVNDVEDVVGVGQKLQVEITKV
DDRGKLSLAPVVDEEEGEGDAE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
gtggaagctactgacattcagtactcagaggccgtgattgataacggccgtttcggtaag
cgcaccatccgtttcgaaaccggccacgtagccaagcaggctgcgggttcggcgatggtg
ttcctcgatgacgacacctcgatgctttcggcgaccaccgccggcaagcacccgcgcgaa
ggcttcgacttcttcccgctcacggttgacgtcgaagagcgcatgtacgccgcgggtaag
atcccgggctcgttcttccgccgcgaaggccgcccatcgaccgaggcgatcctcgcgtgt
cgcctcatggaccgcccgctgcgcccatccttcgtgaagggtctgcgtaacgaggtccag
atcgtggtcatggtgacctcgatcaacccagaggactactacgacgtggttgctatcaac
gcgtcctcgatgtcgacccagctgtccggtctgccgttctctggcccgatcggcggcgtc
cgcatcgccctcatcgacgacggtgaaggcgcacagtgggttgcgttcccaaccaagagc
cagctcgatgacgccgtgttcaacatggttgttgccggccgcgttgctggcgatgacgtc
gcgatcatgatggttgaagctggcgctaccgaccacgcatgggacctcatccacggccgc
ggcgtgaccgcgccaaccgagaccgttgttgctgagggcctcgaggcagctaagccgttc
atccgcgctctcgttgaggctcaggcagacctcgcatcccgcgctgctaagcctgctcgc
gagttcccaatcttcctcgatttcgaggacgacgcatacgaggcagttgagaagctcgca
tccgccaagcttgctgacgtctaccagatcgctgacaagcaggaacgccaggacgccgac
gacgcactcaaggaagaagtccttgaagagctcgcgggcgaaggcaaggagttcgaggag
cgtgcctccgagatctccaaggcatacggcgcagtcactaagcacatcgtgcgccagcgc
atcctcaaggaccaggtccgcatcgacggccgcggcctgacggacatccgtcagctgctc
gccgaggttgaggttctgcctcgcgttcacggttccgcgatcttcgagcgcggcgaaacc
cagatcatgggtgttacgacgctcaacatgctcaagatggagcagcagatcgactcgctc
gcccctgagaaggcgaagcgctacatgcaccactacaacttcccaccgttctccacgggc
gagacgggccgcgttggctcgccgaagcgccgcgagatcggccacggtgccctcgcagag
cgcgcgctcgttccggttctgccttcgcgtgaagagttcccttacgcgatccgccaggtc
tccgaggcgctcggctccaacggttcgacctcgatgggttcggtctgcgcatcgaccctg
tcgatgtacaacgctggtgttccgctcaaggcgcctgttgcaggtatcgcgatgggcctg
gtcaccgacacggttgacggcgagacccgctacgcagccctgaccgacatcctcggcgct
gaagacgcgatgggtgacatggacttcaaggttgccggtacccgcgacttcatcaccgcg
atccagctggacaccaagctcgacggcatcccagcatccgtgctcgccgccgcactcaag
caggctcacgaggctcgcgtccacatcctggatgtcatggactccgcgatcgactcgcca
gacgagatgtcgccatacgctccacgcatcatctccctgaagatcccagtggacaagatc
ggcgaggtcattggccctaagggcaagatgatcaaccagatccaggaagacaccggcgct
gagatctcgatcgaggacgacggcacggttctgatcggcgcgaccgacggcgctgcagct
gaggctgcacgtgcaacgatcaacgcgatggctaacccacagatccctgaggttggcgaa
cgttacctcggtaccgtcgtcaagctgacctcgtttggcgcgttcatctcgctgaccccg
ggcaaggacggcctgctgcatatctccgagctgcgtaagctcaacggcggccagcgcgtc
aacgacgtcgaggacgttgttggtgtgggtcagaagctccaggttgagatcaccaaggtc
gacgaccgcggcaagctctcgctcgcgccagtcgttgacgaggaagaaggcgaaggcgac
gccgagtaa
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