Pseudoglutamicibacter albus: CJ193_003180
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Entry
CJ193_003180 CDS
T09091
Name
(GenBank) DEAD/DEAH box helicase
Organism
palu
Pseudoglutamicibacter albus
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SNF2_assoc
Motif
Other DBs
NCBI-ProteinID:
WIK84858
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Position
702183..705566
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AA seq
1127 aa
AA seq
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MSSAKFPLVDAREVLKKVGGGSFARGKMLVDAGQLSDLAWDSDALKLSGTVLDDGVEVAA
SVTLVSDQSGFLIGEMSCGTDAEPGCKHVAALLIDSNARHMQAKDEREAEEALQPVDAEW
ELALSRILESGRAGRDGQKPEDIQPLGLQFELRDSRDASQRQYGVGQGPKAVGARGARSR
FTLAIRPVIRNPQGRWIRSALRWNTISFKTYGLPLDPEQHRWFCQLVPLYRANGELYFGE
DNDWLIFDDFASGLVFSLLEEAHELGIELVGSGDISGIELVDSGRVYFDAQRTDAGLELI
PTMDIGARTIGVRTIALGEDVAAGTVGRHGVWALAEDGHTVEIAPVDHTLEPEARFLVRR
PSAITVPAGEADHFFSGPYQRLGRRVSFVSSDGSVALPQITPPSLVVVATYQPDDVVVVD
SEVDYGPGGIDDYARDMAAEAQLRTEALKVLTKHGWDELEPHRSNGGLMSHTLEGLATVD
FVRRGIPALEQIPHVRVLDVGKRPVYKELTEAPELTVTTVESDKNDWFDLGLMITVGDRR
IPYADILRALSAGQKRMLMSDKTYVSLDQPLFHHLRSLIEEANMLKENPKDPLRITRYQV
NLWDELAGLATEVSGPDSWHAAIAGLADGAGADAAVPDGVEATLRPYQVEGFRWLASLWR
QGLGGILADDMGLGKTLQVITMLAYMREQWGGTEADAAPEATSASKASVATGGAGPVLVV
APTSVVPNWLAELRRFAPDLKVAGVRDTQAKASQPLAEVAASNDVVVTSYTLFRLDSDVY
QELGWSALVLDEAQFVKNKSTKAHQTARELNARVKFAITGTPLENNLMELWALLAITSPG
LFPSSNKFAEVFGRPIERMGAVEPLERLRRRVRPFMLRRTKAEVMTDLPSKQEQVLAIDL
SEEHRRIYDTRLQRERQKVLHLVEDINRNRFTIFTSLTTLRLMALDPALVDEEEFADVGS
AKLDVLLDYLNSLLAEGHRALVFSQFTSFLKRAGARLDEAGIDYAYLDGATRNREEAIQE
FKDGDAPVFLISLKAGGFGLNLTEADYIFLMDPWWNPAAEAQAVDRAHRIGQTRNVMVYR
MVSAGTIEEKVVALQDAKRELITSVMDGGDGFGSALSADDIRELLAE
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgcgaagtttcctttggttgatgcccgcgaagtcctgaaaaaggttggcggc
ggctcttttgcccgcgggaaaatgctggttgatgcgggtcagttgtctgatcttgcgtgg
gactctgatgcgttgaagctttcggggacggtgctcgacgacggtgttgaggtggccgcg
agcgtcacgttggtttcggatcagtctgggttcctgattggtgagatgtcgtgcggcacg
gacgctgagccgggctgcaagcatgttgccgccctgctgatcgattcgaatgcgcgccac
atgcaggcgaaggatgagcgggaggccgaggaggctctgcagccggttgatgctgagtgg
gagctcgcgctgtcgcggatcctcgagagcggccgcgcgggccgggatgggcagaagcct
gaggatattcagccgctcggtttgcaatttgagctgcgtgattcgcgggatgcttcgcaa
cgccagtatggcgtgggacagggccctaaggcagtgggggcgcgtggcgctcgtagccgg
tttacgttggcgatccgccctgtgatccgtaatccacagggccgctggattcgctctgct
ttgcggtggaacacgatttccttcaagacgtatggtttgccgttggatccggagcagcat
cgttggttctgccagttggttccgttgtatcgcgcgaacggtgaactgtatttcggcgaa
gataacgactggctgattttcgatgacttcgcgtccggcctggtgttttccttgcttgag
gaggcgcatgaactgggcatcgaactcgtgggttcgggcgatatctccggcattgagctg
gttgattccggtcgcgtgtatttcgatgcgcagcgcacggacgccggcctcgagctgatc
ccgacgatggacatcggcgccaggaccatcggcgtcaggaccatcgcgttgggtgaggac
gttgcggccggcacggtcggccggcacggtgtgtgggcgctggctgaggatggccacact
gttgagatcgcgcccgtggaccacactttggagccggaggctcgtttcttggtgcgccgc
ccgtcggccatcactgtccctgccggcgaggcggaccatttcttctctgggccgtatcag
cgcctcggccgccgcgtgagcttcgtgtcctcggacggctcggttgcgttgccgcagatc
actcccccgtcgctggttgtggtggcgacgtatcagccggacgatgtggtggtcgtcgat
tcggaggtcgattacggccccggcgggatcgatgattacgcgcgcgatatggcggctgaa
gctcaattgcgtaccgaagcgctgaaggttctgactaagcatggctgggacgagttggag
ccgcaccgtagcaatggcgggctcatgtcgcacacgcttgaaggccttgcgacggtcgat
tttgtgcgtcgcggcatcccggcgctagagcagatcccgcatgttcgcgtgctcgatgtc
ggtaagcggcctgtctataaggagctgaccgaggcccctgagctgacggtcacgaccgtc
gagtccgataagaacgactggttcgatctgggcctcatgatcacggtgggtgaccgccgc
atcccgtacgccgatattctgcgggcgctgtccgccggccagaagcgcatgctgatgtcg
gataagacgtacgtttcgctggatcagcctctgttccatcatcttcgcagcctcatcgag
gaagcgaacatgttgaaagaaaaccctaaggacccgctgcggatcacccgttatcaggtg
aatctgtgggatgaactcgcggggcttgccaccgaggtttctggccctgattcatggcat
gccgcgatcgctggcctggccgatggtgctggggctgacgccgcggtgccggatggtgtt
gaggcgacactgcgcccgtaccaggttgaggggttccgctggctcgcttcgctgtggcgg
cagggcctgggcggcatcctcgccgacgacatgggcctgggtaaaacgcttcaggtcatc
acgatgctggcatacatgcgtgagcagtggggcggcactgaagccgacgccgcaccggaa
gcaacatccgcttcgaaggcttccgttgctaccggcggcgcgggcccggttttggtggtt
gcgccgacgtcggtggttcctaactggttggccgagttgcgcaggttcgcaccggatttg
aaggtcgctggcgtgcgggatactcaggcgaaagcgtcgcaaccgttggctgaggtcgca
gcaagcaacgatgtcgtggtcacctcgtacacgctgttccgtttggattcggatgtgtat
caggagctcggctggtctgcgctggttctggatgaggctcagttcgtcaagaacaagtcg
accaaggcgcatcagactgctcgggaattgaatgcccgcgtgaagttcgcgatcacaggt
acaccgttggagaacaacctcatggagttgtgggcgcttctggcgatcacttcccccggt
ttgttcccgtcctcgaataagttcgctgaggtgttcggccggccgatcgaacgcatgggc
gctgttgagccgcttgagcgtttgcgccgccgagtccgtccgttcatgttgcgccgtacc
aaggccgaggtcatgacggacctgccgagcaagcaagagcaggttctggcgatcgacctt
tcggaagagcaccgccgcatttacgacacgcgtctgcagcgtgagcgccagaaggtcctg
cacttggttgaggacatcaaccggaaccggttcacgatcttcacctcgctcaccacgctg
cgtctcatggcgttggatcctgcgttggtggatgaagaagagttcgcggatgtgggatcg
gccaagctggatgttttgttggattacctgaactcgctgctggctgagggccaccgcgcg
ctcgtgttctcgcagttcacgtcgttcctcaagcgggctggtgctcggctggatgaggcc
ggcatcgattacgcgtatttggatggcgcgacccgcaaccgtgaggaagcgatccaggag
ttcaaggatggcgacgccccggtcttcttgatttcgctcaaggccggcggtttcggcttg
aacctcacggaggctgactacatcttcctcatggatccgtggtggaaccctgccgcggag
gcccaggctgtggaccgtgcgcaccgcatcgggcagacccgcaacgtcatggtgtaccgc
atggtttctgcgggcacgatcgaagagaaggtcgtggcgttgcaggacgccaagcgtgaa
ctcatcacatccgtcatggacggcggggacggtttcggttccgcgttgagcgctgacgat
atccgcgagctgctggctgaataa
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