Pseudoglutamicibacter albus: CJ193_008630
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Entry
CJ193_008630 CDS
T09091
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
palu
Pseudoglutamicibacter albus
Pathway
palu03030
DNA replication
palu03430
Mismatch repair
palu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJ193_008630 (dnaE)
03430 Mismatch repair
CJ193_008630 (dnaE)
03440 Homologous recombination
CJ193_008630 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palu03032
]
CJ193_008630 (dnaE)
03400 DNA repair and recombination proteins [BR:
palu03400
]
CJ193_008630 (dnaE)
Enzymes [BR:
palu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJ193_008630 (dnaE)
DNA replication proteins [BR:
palu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CJ193_008630 (dnaE)
DNA repair and recombination proteins [BR:
palu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CJ193_008630 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DUF655
DNA_pol_IIIA_C
SPDY
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
WIK84127
LinkDB
All DBs
Position
1910726..1914289
Genome browser
AA seq
1187 aa
AA seq
DB search
MAGSLDDGFVHLHTHTEYSMLDGAARVADLFDEAQRLGMDSMAITDHGYLFGAYDFYRKA
KDKGINPILGVEAYVTPGTARSDRTRVQWGTRDQKGDDVSGGGAYTHMTLWAENNEGWHN
LNQAVSKASLDQVFSRWPRLDRELISQHSKGVIATTGCPSGEIQTRLRLGQYDEALRAAG
EYKDIFGEGNYFLELMDHELEIEHRVRGDLMRIAKDLNLPLVATNDLHYTHEEDAKAHEA
LLAIQSGSTLLEPSYDQGGKRFAFNGSSYYLKSPREMRELFKELPEACDNTLLIAERCKV
DFEASIGKYMPEFPVPEGETESTWLVKEVQRGLHYRYPDGIPEESQKQAEYELDVIERMG
FPGYFLVVADFINWSKDNDIRVGPGRGSGAGSMVAYALRITDLDPLEHGLIFERFLNPER
VSMPDFDVDFDDRRRGETIQYVIEKYGADKVSMIVTYGSIKTKQALKDASRVLGHPFAMG
ETLTKALPPAVMAKDISLWDVENPDAPRYGEAGEFRELLETDPEARKVFETAKGLEGLKR
QWGVHAAGVIMSSDPIIDVVPIMRRLQDGQVITQWDYPICESLGLIKMDFLGLRNLTIIS
DAVENIRLNGGEVPDLERLETNDPAAYELLARGDTLGVFQLDGGPMRSLLRLMRPDNFED
ISAVIALYRPGPMGANSHTNYALRKNGQQEITPIHPELAEPLAEILDTTYGLIVYQEQVM
AIAQKVAGYSLGQADLLRRAMGKKKKEELDRQYQGFHDGMVERGFSEEAITSLWNILLPF
SDYAFNKAHSAAYGLVSYWTAYFKANYPAEYMAALLTSVGTDKDKMALYLNECHRMGIKV
LQPDVNESQNNFAPVGKDIRFGLGAVRNVGAHVVEAIVEAREEKGRFESFSDFLNKVGPQ
ALNKRTIESLIKSGAFDELGHHRRALTAIHEDAVDQAMALKRHEAAHQFDLFSMSGDESL
ANALDVEIPDIAEWDKKEKLSLEREMLGLYVSDHPLQGLGDALGRLADMPIAQVVSDRGP
QDGHTVTIAGMITNLERRVAKNSGNPYAKCEIEDLSGSIEVMFFGQAYQPIATLLAEDLI
VTVKGRFQRRDDGAISISAQELKIPDITADGGAGPLLVQIPTHQATEPIVRQLGDVLRTH
PGKSEVRIRLIGSSTIETMSLGAQYAVTPNAALFGDLKVLLGPDCLV
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
gtggctggaagtcttgacgatggttttgttcatctgcacacccacaccgagtactcgatg
ttggacggtgcggcccgtgtcgctgaccttttcgatgaagcccaacgcttgggcatggat
tcgatggcgatcaccgatcacgggtaccttttcggtgcctacgatttctatcggaaagct
aaagacaaaggcatcaaccccatcctgggtgttgaagcgtatgtgacccccgggaccgcc
cgctccgaccgcacacgcgtgcagtggggcacacgcgaccaaaaaggcgacgacgtctcc
ggtggtggcgcctacacccacatgaccctgtgggccgagaacaacgaaggctggcacaat
ctcaaccaagccgtgtccaaggcatcgctcgaccaggtcttttcgcgctggccgcgcctc
gaccgcgaactcatttcgcaacactccaagggcgtcatcgcaaccaccggctgcccgtcc
ggtgagatccagacccgcttgcgcctaggccaatacgacgaggcgctgcgtgccgcaggc
gaatacaaagacatcttcggcgagggcaactacttcctcgaactcatggaccacgagctt
gagatcgagcatcgggtgcgcggcgacctcatgcgcatcgcgaaagacctcaacctgccg
ctcgttgcgaccaacgacctgcactacacgcacgaagaagacgcgaaggcgcacgaagcg
cttttggcgatccagtccggttcaacgctgctcgagccgtcctacgatcagggcggtaag
cgcttcgctttcaatggcagcagctactacttgaagtccccacgcgagatgcgtgaactg
ttcaaggaactgcctgaagcatgcgataacacgttgctgatcgctgagcggtgcaaggtc
gatttcgaggcatcgatcggtaaatacatgccggagtttcccgtgcctgaaggggagacg
gagagcacgtggctcgtcaaggaagtgcagcgtggcctgcactaccgttacccggacggc
atcccggaggaatcgcaaaagcaggccgaatacgagctcgacgttattgaacgcatgggc
ttcccgggctacttcctcgtggttgcggacttcatcaactggtccaaagacaacgacatc
cgcgtcggccctgggcgtggttcaggtgcaggctcgatggtcgcgtacgcgctacgtatt
acggacctcgatccgctcgaacacggcctgatctttgaacgcttcctcaacccagaacgt
gtttcgatgccggacttcgacgtcgactttgacgatcgtcgccgcggcgaaaccatccag
tacgtgatcgagaagtacggggccgacaaggtctcgatgatcgtgacgtacggttctatc
aaaactaagcaggcactcaaggacgcgtcccgcgtgctgggccacccgttcgcgatgggt
gagacgctcaccaaggcgttgccgccagccgtcatggctaaagacatttcgttgtgggac
gtcgaaaaccccgatgccccgcgctacggcgaagctggcgagttccgcgaactgctcgaa
accgaccccgaagcccgcaaggtcttcgaaaccgcgaagggccttgagggcctcaagcgc
caatggggtgtgcacgcggccggcgtcatcatgtcctctgacccgatcatcgacgtcgtc
ccgatcatgcgtcgcctccaggacggccaggtcatcacccagtgggactatccgatttgt
gagtcgcttggcctcatcaagatggacttcttgggtctgcgtaacctcacgatcatttct
gacgccgtcgagaacatccgtctcaacgggggagaggtaccggacctcgaacgtctcgaa
accaacgatcccgcagcatacgaactcctggcacgcggcgacacgctcggcgtgttccag
ctcgatggtggcccgatgcgctcgctgctgcgcctcatgcgcccggacaacttcgaagac
atctctgctgtcatcgcgctgtatcgtccgggcccgatgggcgctaactcccacacgaac
tacgcgttgcgtaagaacggtcagcaggagatcaccccgatccaccctgagctcgctgaa
ccgctcgccgaaatcctggatacgacgtacggtctgatcgtctaccaggagcaggttatg
gcgattgcgcagaaggtcgcaggctattcgctcggccaggcagaccttttgcgccgtgcg
atgggtaaaaagaagaaagaagagctggaccgccagtaccagggcttccacgacggcatg
gtcgagcgcggcttctccgaagaagcgatcacttcgctgtggaacatcctgctcccgttc
tccgactacgcgttcaacaaagcgcactcggccgcgtatggcctcgtttcctactggacc
gcgtatttcaaagccaactatccggccgaatacatggccgcgcttctgacctcggtcggg
accgataaagacaagatggcgctctacctcaacgaatgccaccgcatgggcatcaaggtt
ctgcagccggacgtcaacgaatcccaaaacaacttcgctccagtcggcaaagacattcgc
ttcggtctcggagcggtccgcaacgtcggcgcccacgtcgtcgaagctatcgttgaagcc
cgcgaagaaaagggacgcttcgaatccttctccgacttcctcaacaaagtcggcccacaa
gcgctcaacaagcgcaccatcgaatccctcatcaaatccggcgcattcgacgagctgggc
caccatcgtcgtgcgctcaccgctatccacgaagacgctgtggaccaagcgatggccctc
aaacggcacgaggccgcgcaccagttcgacctgttcagcatgtccggggacgaaagcctc
gcgaacgcgctcgacgttgaaatcccggacatcgcggaatgggacaagaaggaaaagctc
agcctcgaacgtgaaatgttgggcctctacgtctccgaccacccgctccaggggttaggg
gatgcgctcggcaggctagccgacatgccgatcgcccaggtcgtgtccgaccgcggtccg
caagacggccacaccgtcacgatcgcgggcatgatcacaaacctcgaacgccgcgttgcc
aagaactccggtaatccgtacgcgaaatgcgagatcgaagacctctccggctcgatcgaa
gtcatgttctttgggcaggcgtaccagccgatcgcgaccctgctcgccgaagacctcatc
gtgaccgtcaagggacgcttccagcgccgcgacgacggggcgatctcgatctctgcgcaa
gagctcaagatcccagacatcaccgcagacggcggggcagggccgctcctggtccagatc
ccaacgcaccaagcgaccgaacccatcgtgcggcagcttggtgacgtcctgcgcacccac
ccgggcaagtccgaggtgcgcatcaggctcatcggcagctcgaccatcgagaccatgagc
ctcggagcgcagtacgctgtcaccccgaacgcagcactcttcggcgacctcaaagtgctg
ctcgggccggactgcctcgtctag
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