Pseudomonas alvandae SWRI17: KSS97_00275
Help
Entry
KSS97_00275 CDS
T07736
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
palv
Pseudomonas alvandae SWRI17
Pathway
palv02025
Biofilm formation - Pseudomonas aeruginosa
palv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KSS97_00275 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KSS97_00275 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
palv02044
]
KSS97_00275 (tssM)
Secretion system [BR:
palv02044
]
Type VI secretion system
Imp/Vas secretion system core components
KSS97_00275 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
AAA_10
T7_gp14
Motif
Other DBs
NCBI-ProteinID:
QXI53427
LinkDB
All DBs
Position
complement(58262..61762)
Genome browser
AA seq
1166 aa
AA seq
DB search
MKAFFSFMIRWVIPLLGLIALSLIIWFVGPLLDWLVPEGRRWTLIILVFAVWIAYRVFRI
IQARRQAAEVMRSLAAQTPPDPTSIATAEELETLRQRMDEALALLKKAKLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSDATVDKAAWLGFLGLLKKQRARRPIDGAFIAISLSDLLLGSDAERAAHAAAIR
LRIQELYTQLGVRFPVYLMLTKLDLVPGFMEYFDSLSKEERAQVWGMTFALDDGKSNDSP
LAHLQSEFTLLEQRLNDRLVERLQQERDPARRDLIYGFPQQFGALKDCLQSFLDGVFKPN
AFEERVLLRGVYFTSGTQEGSPIDRLIGSMAQSMNLDRQHLARQTGTGRSYFIEKLFSAV
AFAERGLVGVDPKVERRRKWIARGVLASTVVLVLVVSTLWWVSYRANQAYIAQVDQKVAP
LGQTVQNLSPAQRDVLAVLPLLNSVKHLADDAPDWAEGLGLYQGDMLEAESGSVYRKLLI
AVFAPRLLTRIEEQLHSGGNSDFLYEGLKAYLMLADNEHYDADFIKAWIALDWDRTLPRD
LPAEQRQALTGHLQALFERRPPTARLDPRLIEDLRRQLQQLPVAQRVYDRIKRQKLPEGI
PDFRINEAAGRDAALVFSRKSGKPLGEPLSGFFTVKGYRQGFLLSSLSQTGTLAEEQWVL
GHEEADQQNVASLAADVRRLYFQDYMRQWDALLADIDFVPITSVAQAADVLRVISGPTSP
LKKLLVAVAKETDLQQDERLLAAQGAPVEGGVDKLKERLGSLLGQEQATSNAPATSDDPI
TAHFAELNSIVNKNEGEPAAIDGLLSDMNALYVQVSAMVGASGDALLGEAKNQASAAATR
VSLNAERQPPLVQGLVKSVVNSTTNTMMGGVRNQLNAAWTSEVVNIYRQSLAGRYPMSPG
SARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSTQTWRWQPGAAQKLGISPGVLQTFQ
RAATIRDAFFRSGGTQPMVRFELKPVAMDSTITQFLLDLDGQQLSYDHGPSRPTAMQWPN
PGSIGVVRISIMPPSSSGRSGITLDGPWAWFRLLEQSDLTAGNSPDRFNLRLRVDGASAS
YELRANSAFNPFKSRVLSGFSLPERL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcagtttcatgatccgctgggtcattccattgctggggctgattgcc
ctgagcctgatcatctggttcgttggcccgctgctcgattggctggtgccagaagggcgg
cgctggacgttgatcatcctggtgttcgcggtgtggatcgcctaccgggtgttccgcatt
atccaggcccgccgccaggccgcggaagtgatgcgcagcctggccgcgcagaccccgccc
gacccgaccagcatcgccaccgccgaagaactcgagaccctgcgccagcgcatggacgaa
gccttggccttgctcaagaaagccaagctcggcggcgacgagcgtcgcaacctctacgaa
ctgccgtggtacgtgatcatcggcccgccgggctcgggcaagaccactgcgctggtcaac
tccggcctgcatttcccgttggccgcgcaactcggtgccggtgccgtgcgcggtgtcggc
ggcacgcgcaactgcgactggtggttcaccgaccaggcggtgctgctcgacaccgctggc
cgctacaccactcaagacagcgacgcgaccgtcgacaaggcggcgtggctgggtttcctt
ggcctgttgaagaagcaacgggcgcgtcggccgatcgatggcgcgttcatcgccatcagc
ctttcggacctgctgttgggcagcgacgccgaacgcgccgcccacgccgcagcgattcgc
ctgcggatccaggagttgtacacccagctaggcgtgcgtttcccggtctacctgatgctg
accaagctcgacttggtgccgggcttcatggagtacttcgacagcctgagcaaggaagag
cgcgcccaggtctggggcatgaccttcgccctggacgacggcaagagcaacgacagcccg
ttggcgcacctgcaaagtgaattcaccttgctggagcagcgtctcaatgaccgcttggtc
gaacgcctgcaacaagaacgcgacccggcgcggcgcgacctgatctacggcttcccgcag
cagttcggggcgttgaaggactgcctgcaaagcttcctcgacggcgtgttcaaacccaac
gcctttgaagagcgggtgttgctgcgcggtgtgtatttcaccagcggcacccaggaaggc
agcccgatcgatcgcctgatcggctccatggcccagagcatgaacctggaccgccagcac
ctggcgcgccagaccggcaccgggcgcagttacttcatcgaaaaactcttcagcgccgtg
gcgtttgccgagcgcggactggtgggtgtcgatccgaaggtcgagcgtcgacgcaaatgg
atcgcccgtggtgtgctcgcgtccaccgtcgtgctggtgttggtggtcagcacgttgtgg
tgggtcagctaccgcgccaaccaggcctacatcgcccaggtcgatcagaaagtcgcgccg
ctgggccagaccgtgcaaaacctcagcccggcccagcgcgacgtcctcgcggttctaccg
ctgctcaattccgtcaagcatttggccgacgatgcgcccgactgggccgagggcctgggc
ctgtatcagggcgacatgctcgaagcggagtccggcagcgtctatcgcaagctgttgatc
gcggtgttcgcgccacgcctgctgacgcgcatcgaagagcaactgcacagcggcggcaat
tcggacttcctctacgaaggcttgaaggcttacctgatgctcgctgataacgagcattac
gacgccgacttcatcaaggcctggatcgccctggattgggaccgcaccctgccacgggat
ttgccggccgagcagcgccaggccctgaccgggcatttgcaggcgctgttcgagcggcgt
ccgccgaccgcgcgcctcgacccgcgcctgatcgaagacctgcgccgccagttgcaacaa
ctgccggtggcccagcgcgtctacgaccgcatcaagcgccagaagctgcccgaaggcatc
ccggactttcgcatcaacgaagccgccgggcgtgacgccgcgttggtgttcagccgcaag
agtggcaagccattgggcgaaccgttgagcggcttcttcaccgtcaagggctaccgccag
ggcttcttgctcagcagcctgagccagaccggcaccctggccgaagagcaatgggtgctg
ggccacgaagaggccgaccagcagaacgtcgccagcctggccgccgacgtgcggcgcctg
tatttccaggactacatgcgccaatgggacgccttgctggccgacatcgactttgtgccg
atcaccagcgtggcccaggccgccgacgtgctgcgggtgatttccggcccgacctcgccg
ttgaaaaagctgctggtggcggtggcgaaggaaaccgacctgcaacaggatgaacgcctg
ctggccgcccaaggcgcgccggtggaaggtggcgtggacaagctcaaggagcgcctgggc
agcttgctcggccaggaacaggcgacgtcaaacgcgccggcgaccagcgatgatccgatc
accgcgcatttcgccgagctcaacagcatcgtcaacaagaacgaaggcgaacccgctgcg
atcgacggcctgctgtccgacatgaacgcgctgtacgtgcaggtcagcgccatggtcggt
gccagcggcgatgccttgcttggcgaggccaagaaccaggcgtcggccgccgcgacccgc
gtcagcctcaatgccgaacgccagccgccgctggtgcagggcctggtcaagtcggtggtc
aactccaccaccaacaccatgatgggcggggtacgcaatcaactgaacgccgcctggacc
agcgaagtggtgaacatctatcgccagtccctggccgggcgttatccgatgtcgccgggc
agcgcgcgggacgcgaccctggatgacttcggccagttcttcggcgtcggcggggtgatg
gacaactacttccgcaagtacctgcaaccgtacgtggacacctcgacacagacttggcgc
tggcagccgggcgcggcgcagaagctcgggatctccccgggtgtgctgcagaccttccag
cgcgcggcgaccatccgcgatgcgttcttccgttccggcggcacgcagccgatggtgcgc
ttcgagctcaagccggtggcgatggattcgaccatcacccaattcctcctcgacctcgac
ggccagcagttgagttacgaccacggcccgagccgcccgaccgccatgcagtggccgaac
ccgggcagcattggcgtagtgcggatctcgatcatgccaccgtcgtccagcggtcgttcc
ggcatcacactggacgggccgtgggcctggttccgcctgctggagcaatcggacctgacc
gccggcaactcgccggatcgcttcaacctgcggctgcgggtcgatggcgccagcgcctct
tacgagttgcgcgccaacagtgcgttcaacccgttcaagagccgagtgctcagcggtttc
agcctgccggagcgtctatga
DBGET
integrated database retrieval system
