Pseudomonas alvandae SWRI17: KSS97_01140
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Entry
KSS97_01140 CDS
T07736
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
palv
Pseudomonas alvandae SWRI17
Pathway
palv03030
DNA replication
palv03410
Base excision repair
palv03420
Nucleotide excision repair
palv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KSS97_01140 (polA)
03410 Base excision repair
KSS97_01140 (polA)
03420 Nucleotide excision repair
KSS97_01140 (polA)
03440 Homologous recombination
KSS97_01140 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palv03032
]
KSS97_01140 (polA)
03400 DNA repair and recombination proteins [BR:
palv03400
]
KSS97_01140 (polA)
Enzymes [BR:
palv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KSS97_01140 (polA)
DNA replication proteins [BR:
palv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KSS97_01140 (polA)
DNA repair and recombination proteins [BR:
palv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KSS97_01140 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KSS97_01140 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
GPAT_N
Motif
Other DBs
NCBI-ProteinID:
QXI53592
LinkDB
All DBs
Position
254086..256854
Genome browser
AA seq
922 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDALYAEYKANRPSMPDDMRVQIEPLHASVKALGFPLLCVDNVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSALDVAGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYSQLDIVATLPIRGAKTLAAKLEEHKEM
AFLSYELATIKTDVPLDVGLDDLQMGAPDHEKLAELYTLLEFKSWFEENQRDAKRAGQEI
VEVAEEQPGAAEAKYEVILDQARFDAWLAKLDKAPLFAFVTETNGGDAQHSQLVGLSFAV
APFEAAYIPLTHSYMGVPEQLDRDTVLKALKPLLEDPNKLKVGQHAKFETNILANCAIGG
DQDNGILVQGIAFDTMLESYVLDSTATRHDMDSLALKYLGQSKTDFQDIAGKGVKQLTFD
QISLELAGPYAAEDADVTFRLHQALQEKLAATPSLGKVLSEIEMPLMPVLARIERQGALV
DANLLGAQSVELGEKLVALEREAFAIAGEEFNLGSPKQLGVILYEKLGLPVLSKTAKGQA
STAEAVLAELAEQDYPLPKVLMQYRSLSKLKSTYTDRLPEQINSRTGRVHTNYQQAVAAT
GRLSSIDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLHA
FRNDLDVHRATAAEVFGVELQAVTHDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQA
YIDRYFARYPGVLEYMERTRAQAAEQGFVETIFGRRLYLPDINAKNPALRKGAERTAINA
PMQGTAADIIKKAMVAVDRWLATSGLDAKVILQVHDELVLEVREDLVDQVSGEIRQHMSA
AATLDVPLLVEVGVGNNWDEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcttcttatctgtaccgcgcctttcac
gcgctgccaccgctgaccacgtccaaaggcctgccgacaggcgcggtcaagggcgtgctg
aacatgctcaagagtctgcgcaagcagtacccggacagtccgttcgccgtggtgttcgac
gccaagggtgggacgtttcgcgatgcgctgtacgccgaatacaaggctaatcgcccgagc
atgcccgacgacatgcgggtgcagatcgagccgctgcacgccagcgtcaaggccctgggc
ttcccgctgctgtgcgtggacaacgtcgaggccgatgacgtgatcggcaccctggcgcgc
agcagcgcggcggctgaccgtccggtggtgatctccaccggcgacaaggacatggcgcag
ttggtcgatgggcacattaccttggtcaacacgatgaccggtagcgccttggacgtggct
ggcgtgaaggagaagtttggcgtcgctccggagcagatcatcgattacctggcgttgatg
ggcgattcgtccgacaacatcccgggcgttccgggcatcgggccgaagaccgcttccggc
ctgctggtgggcgtcaatggcggcctgaccgaactgtattcacagctggatattgtcgcc
acgctgccaattcgcggtgccaagaccctggccgccaagctcgaagagcacaaggaaatg
gccttcctctcctatgagctggcgaccatcaagaccgacgtgccgctggatgtcggcctc
gacgacctgcagatgggcgcgccggatcacgagaaactggccgagctttacaccttgctg
gagttcaagagctggtttgaagaaaaccagcgggacgccaagcgtgccggccaggagatc
gtcgaagttgccgaagaacagcccggcgctgccgaggccaagtacgaagtcatccttgac
caggcgcgcttcgacgcgtggctggcgaaactcgacaaggcgccgctgtttgccttcgtc
accgaaaccaacggaggcgatgcccagcactcgcaactcgttgggttgtcgtttgccgtg
gcgcctttcgaagcggcgtatatcccgctgacgcattcctacatgggcgtgcccgagcag
ttggaccgcgacacggtgctcaaggcgctcaagccgctgctggaagatccgaacaagctc
aaggtcggccagcacgccaagttcgaaaccaatatcctggccaactgcgccatcggtggc
gaccaagacaacggcatcctggtccaaggcattgccttcgataccatgcttgaatcctac
gtgctggattccaccgcgactcgccacgacatggacagcctggcgctcaagtacctgggc
caaagcaagaccgacttccaggacatcgcgggcaaaggcgtcaagcaactgaccttcgac
cagatatccctggagctggcggggccttatgccgccgaagacgccgacgtaaccttccgc
ctgcaccaggccttgcaggaaaaactggccgccacgccgagcctgggcaaggtactcagc
gagattgaaatgccattgatgccggtcctggcgcggatcgagcgccaaggggcgctggtc
gatgccaacctgctgggcgcgcagagtgtcgagctgggcgagaaactggtggccctggag
cgtgaggcatttgccatcgccggcgaggaattcaacctgggctcgccgaagcaattgggc
gtcatcctgtacgaaaaacttggcctgccggtgctcagtaaaaccgccaagggccaggcg
tccaccgccgaagcggtgctcgccgagctggcggagcaggattacccgctgcccaaggtg
ctgatgcagtaccgctcgctgagcaagctcaagagcacctacaccgatcgcctgccggag
cagatcaacagccgcaccgggcgcgtccataccaattaccagcaagccgtcgctgcgacc
ggacgcctgtcgtccatcgacccgaacctgcagaacattccgattcgcacggccgaaggt
cggcgcatccgccaggccttcgtcgcgccgaaaggctacaagctgctggcggcggattat
tcgcagatcgagctgcggatcatggcgcacctggccaaggatgaaggtctgctccatgcg
ttccgcaacgacctggatgtgcaccgtgccaccgccgccgaagtgttcggcgtcgaactg
caagccgtcacccatgatcagcgtcgcagcgccaaggcgatcaacttcggcttgatctac
ggcatgagcgcgttcggcctcgccaagcagattggcgtcgatcgcaagcagtcccaggcc
tacatcgaccgctacttcgcccgttacccgggtgtgttggaatacatggagcgcacccgc
gcccaggcggccgagcaaggtttcgtcgaaaccattttcggtcgtcgcttgtacctgcca
gacatcaacgcgaagaacccggccctgcgcaaaggcgccgagcgcaccgccatcaacgcg
ccgatgcaaggcaccgcggctgacatcatcaagaaagccatggtggccgtggatcgctgg
ctggcgacctcagggctggatgcgaaggtgatcctgcaggtccacgacgaactggtcctg
gaagtgcgcgaagacctggtcgatcaggtgagcggggaaatccgccagcacatgagcgcc
gccgccacgctggacgtgccgctgttggtagaagtaggtgtgggcaataactgggatgag
gcgcactga
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