Pseudomonas alvandae SWRI17: KSS97_01525
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Entry
KSS97_01525 CDS
T07736
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
palv
Pseudomonas alvandae SWRI17
Pathway
palv02025
Biofilm formation - Pseudomonas aeruginosa
palv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KSS97_01525 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KSS97_01525 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
palv02044
]
KSS97_01525 (tssH)
Secretion system [BR:
palv02044
]
Type VI secretion system
Imp/Vas secretion system core components
KSS97_01525 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
AAA_16
ClpB_D2-small
AAA_22
NBD_SMAX1
Clp_N
nSTAND3
NACHT
AAA_25
Sigma54_activat
AAA_29
IstB_IS21
AAA_18
T2SSE
AAA_24
Hpr_kinase_C
Sec3_CC
Motif
Other DBs
NCBI-ProteinID:
QXI53668
UniProt:
A0ABX8QH91
LinkDB
All DBs
Position
339847..342432
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AA seq
861 aa
AA seq
DB search
MINVDLQQLIQALDADTRRDLERSAERCVDRGASKVLVEDLLQSLLERGQGLLGRALQDA
GISASELDATLQPRAEHGASRNPVFAPELIQWLQDALLLANLELGQSNVTEAALILALLR
NPGRHAGTHYQSLLARLNIDRLKAFALSRQAQQATGHAIAQGDSLLQRFTHNLTQQARDG
KLDPVLCRDGEIRQMIDILSRRRKNNPIVVGEAGVGKTAIVEGLALRIAAGAVPSGLEGV
EVLSLDMGLLQAGASMKGEFERRLNGVIEGVKTSPSPIILFIDEAHTLIGSGGNAGGSDA
ANLLKPALARGELRTIAATTWSEYKKYFEKDPALARRFQPVQLHEPTISEAVTILRGLAG
VYEASHGIYLRDDAVVAAAQLSARYLAGRQLPDKAVDVLDTACARVRISLAAAPQRLERL
RGELAEGERQRQALCRDAEAGLSIDAQALEALRVRLKAIEEECQCLEVQWTEQSVLAERL
LSLRRQLAGLRENRADKGLEIETLEAALHETHNALVDAQAEERLVSFEVCPRLVAEVINA
WTGVPLSQLACEHNVKIARFAADLRSRIRGQEPAVQTLDRAMRAAASGLNKPDAPAGVFL
LVGPSGVGKTETALALAELLYGGDRFITTLNMAEFQEKHTVSRLIGAPPGYVGFGEGGML
TEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGLANDGEGREIDFRNTLILMTSNLGS
ERISALCQNGAAPSAEQLEEAIRPLLSRHFKPALLARMRVVPYFPVSGSVLRELVEIKLG
RLGERLQRRQLGFSYCTQLVDYLVQRCTHSDSGARLIDQLLELHLMPGLSDGLLAAMAIG
EQPQQVHATLDEQARVTCEFK
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgtagaccttcagcaactcattcaggcgctggacgcggatacccgccgcgac
ctggagcgctcggccgagcgatgcgtggatcggggcgcaagcaaggtcctggtggaagat
ctgttgcagagtttgctggagcgaggacaagggctgctcgggcgcgcgttgcaggatgcc
gggataagcgcgagcgagctggacgcaaccttgcaaccgcgtgcggaacacggcgcttcg
cgtaacccggtcttcgcgccggagttgatccaatggcttcaggatgcgctgctgttggcc
aatctcgagctgggccagagcaacgtcactgaagctgcgctgatcctggcgttgttgcgc
aacccaggtcggcatgccggtactcattaccaatcgttgctcgctcggttgaacatcgac
cggctgaaggcgttcgccttgtcacggcaggctcaacaggcgactggacacgccattgct
caaggcgattcgcttctgcagcgcttcactcacaacctgacgcagcaggcccgtgacggc
aagctggatcccgtgctttgccgggacggcgaaatccgccagatgatcgatatcctgtct
cgccgacgtaaaaacaatccgatcgtcgtcggtgaggcaggcgtgggcaagacagccatt
gtcgaaggactggccctgcgcattgccgccggggcagtaccgtcagggcttgagggtgta
gaggtcttgtcgctggacatgggcctgctgcaggccggagccagcatgaaaggcgaattt
gagcggcggctcaatggggtaatcgagggcgtaaagacatcgcccagccccatcattctg
ttcatcgacgaagctcatacattaatcggctcgggtggaaatgctggtggttccgatgcg
gccaacctgctcaagccggccctggcccgaggcgagctgcgcaccatcgcggcgacgact
tggagcgaatacaaaaaatatttcgagaaggatccagcccttgcccgtcgtttccaaccg
gtgcagttgcacgagccgaccatcagcgaggcggtgaccatcctgcgggggctggccggg
gtctacgaggcgagccacggtatctatctgcgcgatgatgcggtggtcgcggcggcgcag
ttgtcagcacgctacctggcggggcgtcagttgccggacaaggcggtcgatgtgctggat
accgcgtgcgcccgtgtgcgcatcagccttgctgccgcgccgcaacgccttgagcgcctg
cgtggcgaattagccgaaggtgagcgccagcggcaggcgttgtgtcgcgatgcagaggcc
ggcttgtcaatcgatgcccaggcattggaagcgctgcgggtacgactgaaggccatcgaa
gaggaatgccaatgcctggaagtccaatggacagagcagagcgttctggccgaacgtttg
ttatcgctgcgccggcaactggctgggctgcgggaaaatcgggcggacaagggcctggag
atcgaaacgctggaagcggcgttgcatgaaacccacaacgccttggtggatgcacaggcc
gaagaacgcctggtcagttttgaggtgtgcccgcgcttggtggcggaagtgatcaatgcg
tggacgggtgtcccgctgtcgcagctggcctgcgagcacaacgtgaaaatcgcccgtttc
gcggcagatctacgcagccgaatcagggggcaggaaccggcggtgcagacgcttgatcga
gcgatgcgcgcagccgcctcaggcttgaacaaacccgacgccccagcgggtgtgtttttg
ctggtagggccgagtggggttggcaagaccgaaacggcattggccttggccgagttgctg
tacggcggcgaccggttcatcacgacactcaacatggccgagtttcaggaaaaacacacg
gtttcgaggctcatcggtgcgcctccaggttatgtcggatttggcgaaggcgggatgctc
accgaggctgttcgacaaaagccttactcggtggtgttgctcgatgaggtcgaaaaagcc
gatccggacgtgctgaatctgttctatcagatattcgacaaaggcctggccaacgatggc
gaagggcgggagatcgactttcgcaatacgctgattctgatgacgtcgaacctgggcagt
gagcgtatcagcgcgttgtgccaaaacggggcagcgccgagtgccgaacaactcgaagaa
gcgattcggccgctgctcagcaggcatttcaaaccggcgttactggcccgtatgcgtgtg
gtgccatatttccccgtcagcggctcggtgctgcgcgagctggtggaaataaagctgggt
cgtctgggcgagcggctgcagcgtcgccagttgggcttcagttattgcacgcagcttgtt
gattaccttgtccagcgctgcacccacagcgacagcggtgcgcggctcatcgatcaattg
ctcgaactgcatctgatgcccgggttgtccgacggcttgctcgcggccatggccatcggc
gaacaaccacagcaggtacacgccacgctcgatgaacaagcccgcgtgacgtgtgagttc
aagtga
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