KEGG   Pseudomonas alvandae SWRI17: KSS97_01530
Entry
KSS97_01530       CDS       T07736                                 
Name
(GenBank) sigma 54-interacting transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
palv  Pseudomonas alvandae SWRI17
Brite
KEGG Orthology (KO) [BR:palv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:palv03000]
    KSS97_01530
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:palv02044]
    KSS97_01530
Transcription factors [BR:palv03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    KSS97_01530
Secretion system [BR:palv02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   KSS97_01530
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 AAA_5 GAF_2 GAF AAA_16 AAA_2 HTH_30 AAA HTH_50 GAF_3 AAA_7 Parvo_NS1 TIP49
Other DBs
NCBI-ProteinID: QXI56022
LinkDB
Position
342441..343955
AA seq 504 aa
MLSHVPEPLAYAEALLGQFSSLSQSADDATLLGDFIRGTARLSGCELAQLFLVDAAHCRL
ELSTECLEDRLQFRDPAGLPVDYDGEQLLQFVLRQNRRVCLGALSDSLHDTRFLPARAAP
WQSLLCVPLATGDGIKGVLVCASTQQIELQGFADSLGYLGAFALKQIQLLQHQRRPAAEG
RPVAINLPSANGFGLIGKSAAMRQSCQLISKVVNSPYTVLLYGETGTGKEVVARAIHDCG
PRRTQAFIVQNCAALPEQLLESELFGYRKGAFTGADRDRIGLFDAADKGTLLLDEIGDMP
LSLQAKLLRVLQEGEIRPLGSNLTHKIDVRIIAATHRDLKRLMSEGKFREDLYYRLAQFP
IQLPPLRQRGPDIIELARHFADKACALLQRDLVHWSDAALAHLAAYDFPGNVRELKGIVE
RAVLLCEGDELRVEHFALHIKHRPDEGRISLRDRMEHIERSLMIDCLRKNSGNQTLTARE
LGLPLRTLLYRMSRLNIRRKDAEV
NT seq 1515 nt   +upstreamnt  +downstreamnt
ttgttgagtcatgtgcctgaaccgctggcttacgccgaagcgctgctgggacagttttcc
agcctttcgcaatcggcggacgatgcgaccttgctcggcgatttcatcagggggacggcg
cggctcagtggctgtgagctggcgcagttatttctggtggatgccgcgcactgtcgcctg
gaactgagtaccgaatgcctggaagaccgattgcagtttcgtgacccggccggcttgcct
gtcgattacgacggtgagcaactgttgcaattcgtcctgcgccagaatcgcagggtatgc
cttggtgcgttgagcgacagcctgcacgatacgcgtttcctgccggcccgcgctgcgccg
tggcaatcgctgctctgtgtgccgctagccaccggggacgggatcaagggggtattggtt
tgcgccagcacccagcagatcgaactgcagggattcgctgattccctgggttatctgggg
gcgttcgcgctgaagcagatccagctgttgcaacaccaacggcgtcctgccgctgaaggt
cggcctgtggcgatcaacctgccgagcgccaatggtttcggcctcatcggcaagagcgcg
gcaatgcgccagagctgtcaactgatcagcaaagtcgtgaacagcccgtacacggtcctg
ttgtatggcgagacgggtaccggcaaggaagtcgtggcccgggcgatccacgattgcggg
ccgcgtcgcacgcaggcgttcatcgtccagaactgcgcggcgcttcccgagcaactgctg
gaaagcgaattgtttggttatcgcaagggcgcgtttaccggcgccgatcgtgaccgcatc
ggcttattcgacgcggctgacaagggcacattattgctcgatgaaattggcgacatgccc
ttgtccctccaggccaagctgttgcgcgttttgcaggagggcgagattcgtccgttgggg
tcgaacctcacccacaagatcgacgtgcgcatcatcgccgctacccatcgcgacctgaaa
cggttgatgagcgaaggcaagttccgcgaggacctgtattaccgccttgctcagtttccc
atccaattgccgccgctgcgtcagcgtggccccgacatcatcgaactggctcggcacttc
gccgacaaggcttgtgcgcttctgcagcgcgatcttgtgcattggtccgacgctgcgctg
gcccacctggctgcctatgacttccccggaaacgtacgcgagctcaaaggcatcgtcgaa
agggcggtgctgttgtgcgagggcgacgaattacgcgtagagcactttgccctgcacatt
aaacaccgacccgatgaaggtcgcataagcctgcgcgaccggatggaacacatcgagcgc
agcctgatgattgattgcctgcgcaagaattccggtaaccagacgctgacggctcgcgag
ctcggcttgccgctgcgcacgctgttgtatcggatgagtcggctgaacattcgccgcaag
gacgccgaagtctga

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