Pseudomonas alvandae SWRI17: KSS97_02495
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Entry
KSS97_02495 CDS
T07736
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
palv
Pseudomonas alvandae SWRI17
Pathway
palv00521
Streptomycin biosynthesis
palv00523
Polyketide sugar unit biosynthesis
palv00525
Acarbose and validamycin biosynthesis
palv00541
Biosynthesis of various nucleotide sugars
palv01100
Metabolic pathways
palv01110
Biosynthesis of secondary metabolites
palv01250
Biosynthesis of nucleotide sugars
Module
palv_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KSS97_02495 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KSS97_02495 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
KSS97_02495 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KSS97_02495 (rfbB)
00525 Acarbose and validamycin biosynthesis
KSS97_02495 (rfbB)
Enzymes [BR:
palv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
KSS97_02495 (rfbB)
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Ortholog
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
KR
Motif
Other DBs
NCBI-ProteinID:
QXI53846
UniProt:
A0ABX8QER4
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All DBs
Position
complement(570594..571676)
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AA seq
360 aa
AA seq
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MRILITGGAGFIGSALIRHLIGHTDHQVLNLDKLTYAGNLESLSSIDHDSRYEFVQADIV
DQPTISAVLGRFKPDAIMHLAAESHVDRSIDGPADFIQTNIVGTYSLLEATRAYWQTLAE
PQKRAFRFHHISTDEVYGDLHGVDDLFTETTAYAPSSPYSASKAASDHLVRAWQRTYGLP
VLLTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGDGLQVRDWLFVEDHARALLKVVT
EGVVGETYNIGGHNEQKNIDVVRNICALLEELAPHKPAGVEHYADLITFVKDRPGHDLRY
AIDAGKIERELGWTPSETFESGLRKTVQWYLENLSWCRRVQDGSYQGERLGSLDNKDTIA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctcattaccggcggcgccggcttcatcggctcggctttaatacgacatttg
attggccatactgaccatcaggtcctgaacctcgacaaactgacctacgctggcaacctg
gagtcgctgagcagcatcgatcacgatagccgctacgagttcgtgcaggccgacatcgtc
gaccaaccgacgatcagcgcggtgctggggcgattcaaacctgacgccatcatgcacctg
gccgcagaatcccatgtggaccgctccatcgacggtccggcggatttcatccagaccaat
atcgtcggcacctacagcctgctggaagccacccgtgcctattggcaaaccctggccgaa
ccgcaaaagcgggcgtttcgcttccaccacatttccaccgacgaagtgtatggcgacctg
catggcgtggatgacctgttcaccgaaaccaccgcctacgccccaagctcgccgtattcg
gccagcaaggcggcgtccgaccatctggtccgcgcctggcaacgtacgtatggcctgccc
gtgctgctgaccaactgctcgaataactacggaccctttcacttccccgaaaagctgatt
ccgctggtgatcctcaacgccctggccggtaaaccgctgccggtgtatggcgatgggctg
caagtgcgcgactggctgttcgtcgaggaccacgcgcgggcgctgctcaaagtcgtcacc
gaaggggtggtcggtgagacctacaacatcggcggccacaatgaacaaaagaacatcgac
gtggtgcgcaacatctgtgcactccttgaagagctggcgccgcacaagcccgcgggcgtc
gagcactacgccgacctgatcaccttcgtcaaggatcgtcccggccacgacctgcgctac
gccatcgatgccggcaagatcgaacgggagctgggctggacaccatcggaaaccttcgag
agcggactgcgcaagaccgtgcagtggtacctcgaaaacctgtcgtggtgccggcgcgtc
caggatggcagttatcagggcgagcgcctgggctcactcgacaacaaggatacgattgca
tga
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