KEGG   Pseudomonas alvandae SWRI17: KSS97_02670
Entry
KSS97_02670       CDS       T07736                                 
Symbol
vapC
Name
(GenBank) tRNA(fMet)-specific endonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
palv  Pseudomonas alvandae SWRI17
Brite
KEGG Orthology (KO) [BR:palv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:palv03016]
    KSS97_02670 (vapC)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:palv02048]
    KSS97_02670 (vapC)
Transfer RNA biogenesis [BR:palv03016]
 Prokaryotic type
  tRNA degradation factors
   KSS97_02670 (vapC)
Prokaryotic defense system [BR:palv02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    KSS97_02670 (vapC)
SSDB
Motif
Pfam: PIN PIN_3
Other DBs
NCBI-ProteinID: QXI53877
LinkDB
Position
complement(606416..606832)
AA seq 138 aa
MIKFMLDTNICVFTIKNKPQVVREAFIRHHGQLCISAVTLMELIYGAEKSSAPEKNLSVI
EGFCARLEVLPFGYDAAAHTGMIRAELAKIGKPIGPYDQMIAGHARSLGLIVVTNNLKEF
ERVPGLRVEDWTPLALKP
NT seq 417 nt   +upstreamnt  +downstreamnt
atgatcaagttcatgctcgataccaacatttgtgttttcaccatcaagaacaagccccag
gtcgttagagaagcgttcattcgtcatcacggccagctttgcatcagcgccgtcacgctt
atggaattgatatacggtgcagaaaaatcatccgcaccagagaaaaacctcagcgtcatt
gaagggttctgtgcacgacttgaggtcttaccttttggttatgacgccgcagcacacacc
ggaatgatccgggcggaattggccaaaataggcaaaccaatcggcccctacgaccaaatg
attgccggccacgcccgttccctcgggctgatcgtagtcaccaataatctgaaagagttt
gagagagtgcccggactgcgtgtcgaggattggactcccttggctttaaagccttga

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