Pseudomonas alvandae SWRI17: KSS97_09840
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Entry
KSS97_09840 CDS
T07736
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
palv
Pseudomonas alvandae SWRI17
Pathway
palv03030
DNA replication
palv03430
Mismatch repair
palv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KSS97_09840 (dnaX)
03430 Mismatch repair
KSS97_09840 (dnaX)
03440 Homologous recombination
KSS97_09840 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palv03032
]
KSS97_09840 (dnaX)
03400 DNA repair and recombination proteins [BR:
palv03400
]
KSS97_09840 (dnaX)
Enzymes [BR:
palv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KSS97_09840 (dnaX)
DNA replication proteins [BR:
palv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KSS97_09840 (dnaX)
DNA repair and recombination proteins [BR:
palv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KSS97_09840 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
ResIII
AAA_14
AAA_18
TIP49
AAA_30
AAA_2
AAA_19
TsaE
PIF1
nSTAND3
AAA_7
HasA
Rad17
SKI
Mg_chelatase
zf-CXXC
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
QXI55208
LinkDB
All DBs
Position
2194204..2196279
Genome browser
AA seq
691 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSSPCGECSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM
LGTLDHGQVYDVLHALIEGDAKALLEAVRHLAEQGPDWNGVLSEILNVLHRVAIAQALPD
GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADTSDAPRQALKPVGISQATADSAKPVAAAPVVAPAAAPVPAEVAPVAQPVPAPAVATPE
PEPEPRAEALPEPVAEAVIDLPWNDPVEPEVVQQPAVEPVLETVAEQPELPPMPMPTPDS
AVPDAPEWVAAPMPEPTVADVDVATPGIDLDDEPPLDEDYIEPDMDSAYSYLDDLASEHA
AEPAPEPEPEPAAMPATGLALQWLELFPKLQISGMTGSIAANCTLISVEGDHWLLHLDPA
HSALFNATQQRRLNDALNQYHQRTLTLTIELIKPEQETPAQAASRRRADRQREAEDSIHN
DPFIQQMMQQFGAVVRHDTIEPVEAPVPQGS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggctctgatcaatgccttggacagccagcggctgcaccacgcc
tatctgttcacgggcacccgtggcgtgggcaagaccaccatcgcgcggatcatcgccaag
tgcctgaactgtgaaaccggcatcacctcgtcgccctgcggcgaatgttcggtctgccgg
gaaatcgacgaaggccgttttgtcgacctgatcgaaatcgacgccgccagccgcaccaag
gtcgaggacacccgcgaactgctcgacaacgtgcagtacgcgccgagccgtgggcgcttc
aaggtctacctgatcgacgaagtgcacatgctctccagccattccttcaatgcgctgctc
aagacgctcgaagaaccaccgccctacgtcaagttcatcctggcgaccaccgatccgcag
aaactccctgcaacgattctgtcgcggtgcttgcagttctccctcaagaacatgacgccg
gaacgcgtcgtcgagcatttgacccacgtgctgggcgtcgagaacgtgcccttcgaagac
gacgcgctgtggctgttgggccgcgccgccgatggttcgatgcgcgacgccatgagcctg
accgaccaggccatcgcgttcggcgaaggcaaggtcatggccgccgatgtgcgggcgatg
cttggcacgcttgatcacggccaggtctatgacgtcttgcacgcattgatcgaaggcgat
gccaaggcgctgctggaagcggtgcgtcacctggccgagcagggaccggactggaatggc
gtgctctcggaaattctcaacgtgctgcaccgtgtcgccatcgcccaggccctgcctgat
ggcgtcgacaacggtcatggcgaccgtgatcgcgtactggccctggcccaggcgctgccg
gccgaggacgtgcagttctattaccagatgggcctgatcggccgtcgcgacctgcccctg
gcgccggacccgcgaggcggtttcgaaatggtcttgctgcggatgcttgcgttccggccc
gccgatacgtcggatgcgccgagacaagcgctaaagccagtggggatcagccaggccaca
gctgattccgccaagccagtggctgccgcgcccgtggttgcgccggcagcggctcctgtt
ccggcagaggtggcgcctgtagcccagccggtgccggcgcctgccgtcgcgacacccgag
ccggaacctgagccgcgcgccgaggcgcttcccgagccggttgccgaagccgtcatcgac
ctgccttggaacgatccggtcgagccggaagttgtccagcaaccggccgtcgagcccgtt
ttggagaccgttgccgagcagcctgaattgccgccgatgcccatgccgacgccggacagc
gcagtgcctgacgcgccggagtgggtggctgcaccgatgccggagccaacggtggccgac
gtcgatgtcgccacgccgggcatcgacctggacgacgagccgccgctggacgaggactac
atcgaaccggacatggattcggcctacagctacctggatgacctggccagcgagcatgcc
gccgagccggccccggagcccgagccggaaccggcggcgatgccggccaccggattggcc
ctgcaatggctggagctgttcccgaagctgcagatcagcggcatgaccggcagcatcgcc
gccaactgtacgctgatctcggtggagggcgaccattggttgctgcacctggatccggcc
cacagcgcgctgttcaacgcgacccagcagcgtcgcctcaacgatgcgctgaaccagtac
catcagcgcaccctgacgttgaccatcgagctgatcaagcccgagcaggagacgccggcc
caggccgcgtcccggcgccgtgccgaccggcagcgtgaagccgaggattcgatccacaac
gatccgttcatccagcagatgatgcaacagttcggcgccgtggtccgtcacgatactatc
gaacctgtcgaggccccggtcccccagggctcataa
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