Pseudomonas alvandae SWRI17: KSS97_11730
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Entry
KSS97_11730 CDS
T07736
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
palv
Pseudomonas alvandae SWRI17
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palv03032
]
KSS97_11730
03400 DNA repair and recombination proteins [BR:
palv03400
]
KSS97_11730
Enzymes [BR:
palv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KSS97_11730
DNA replication proteins [BR:
palv03032
]
Prokaryotic type
DNA Topoisomerases
KSS97_11730
DNA repair and recombination proteins [BR:
palv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KSS97_11730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QXI55568
LinkDB
All DBs
Position
complement(2616959..2617996)
Genome browser
AA seq
345 aa
AA seq
DB search
MPDTPMPDALPADLHYVDDTAPGITRRKLRGKFCYFDPSGERITDATEIQRINALAVPPA
YTDVWICTDPRGHLQATGRDARGRKQYRYHPRWREVRDADKYSRMLEFGRTLPRLRKRLE
DILAAPGFSRDKVMATVITLLDVTLIRVGNTQYARDNRSYGLTTLRNKHVAVNGSAIAFQ
FRGKSGIEHQITVKDRRLARIIRRCQEMPGQNLFQYLDENGERHAVTSSDVNAYLKTLTG
ADFTAKDYRTWAGSAAALEGLRTLQWETETEAKRHVAEMVRQVARQLGNTPAVCRKCYIH
PAVLEGFMGGVLHELPKPRVRKGLSAQEAALTMFLERMAHAVEAC
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcccgataccccaatgcccgatgcgctcccggccgacttgcattacgtcgacgacacg
gcgccgggcatcacccgcaggaaactgcggggcaagttctgttatttcgatccatcgggc
gagcgcatcaccgacgcaaccgaaatccagcgcatcaatgccctggccgttccgccggcc
tacaccgatgtctggatctgcaccgacccgcgcggccatctccaggccaccggccgcgat
gcccgtgggcgcaagcagtaccgttatcatccacgctggcgcgaagtgcgcgatgccgac
aagtattcacgcatgctggagtttggccgcaccctgccccgcttgcgcaagcgcctggaa
gacattctcgccgccccgggcttcagccgcgacaaagtcatggcaacagtcatcaccttg
ctcgacgtgaccctgatccgcgtcggcaacacccaatacgcccgggataatcgttcctac
ggcctgaccacgctgcgcaataagcacgtcgcggtcaacggcagtgccatcgcgttccag
ttccgtggcaaaagcggcatcgaacaccagatcaccgtgaaagaccgacgcctggcgcgc
atcatccggcgctgccaggaaatgcccggacagaatctgttccagtacctggacgagaac
ggcgagcgccacgccgtcacctcatcggacgtcaacgcctacctcaagacactcaccggc
gcggatttcaccgccaaggattaccgcacctgggcgggcagcgcggcagccctggaggga
ctgcgcacattgcaatgggaaaccgaaaccgaggccaagcgacacgtcgccgagatggtc
cggcaagtcgcccggcagttgggcaacacgccagccgtctgtcgcaaatgctacatccat
cccgccgtactggaaggcttcatgggcggcgtcctgcatgaactgcccaagcctcgggtg
cgcaagggcctcagtgcgcaggaagcggcgctgacgatgttcctggaacgcatggcccac
gccgtcgaagcctgttga
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