Pseudomonas alvandae SWRI17: KSS97_12175
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Entry
KSS97_12175 CDS
T07736
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
palv
Pseudomonas alvandae SWRI17
Pathway
palv02025
Biofilm formation - Pseudomonas aeruginosa
palv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KSS97_12175 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KSS97_12175 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
palv02044
]
KSS97_12175 (tssH)
Secretion system [BR:
palv02044
]
Type VI secretion system
Imp/Vas secretion system core components
KSS97_12175 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
Clp_N
AAA_22
AAA_16
nSTAND3
Zeta_toxin
NBD_SMAX1
AAA_7
ResIII
AAA_14
AAA_25
T2SSE
IstB_IS21
ClpB_D2-small
Sigma54_activat
NACHT
AAA_23
SRP54
FtsK_SpoIIIE
DUF1192
IPT
Motif
Other DBs
NCBI-ProteinID:
QXI55651
UniProt:
A0ABX8QK88
LinkDB
All DBs
Position
complement(2714760..2717303)
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AA seq
847 aa
AA seq
DB search
MELASLIGRLNPDNRRALERAAQRCLQRSHHYVEIEHLLLELLDIEGGDFACLLPRFGLE
RDAVAAETNKALDLFKSGSTRTPALSAQTIGLLEDAVVQASVLGLDSIRSGLLLLALLDR
DERRSLLLNSASSLLRIPRDALRTHLLEWTESSREHVAGMRPAKPGEPPQKQDPVLDQYT
QDLTADARAGRIDPIVGRDGEIRQCIDILLRRRQNNPILVGAPGVGKTAVVEGLALRIAA
GDVPPSLQEVTLRVLDLGLLQAGAGVKGEFEQRLKGVIDAVRSAEKPIILFIDEAHTLIG
AGGAEGGSDAANLLKPALARGELRTLAATTWLEYKKYFEKDPALARRFQLVQVEEPDELT
AVEMLRGVASKLEQHHGVQVLDAAIHEAVKLSHRYISGRQLPDKAISVLDTACARVALGQ
HDVPPPLESLRHRQNSLKDEVERLRREQATGLDHRERITLLEGESASNVQAIRELETRWG
EEREAVRELLDTRRELLALSERADSEKADTEIDNRIDHLAAELLRLEAGLDAIRQDDPLV
PEQVDSKTVAAVIAGWTGIPVGKMLADEAHAVRTLGQRMGQRVMGQGTALNTIAQRLQAY
RAGLTDPQKPVGVFLLVGPTGVGKTETAYALADALYGGERNLISINLSEYQEAHTVSQLK
GAPPGYVGYGSGGVLTEAVRRKPYSVVLLDEIEKAHPDVLEAFYNVFDKGLMEDGTGLVV
DFKNTVMLATSNVGAELLLDTPVAQLGSDAFNEALHKVLLQAFRPAFLARMTVVAYRPLD
EATLEGIVLAKLEKLRGRYKAATGKQFEFDAGIVKAVLAKCSAAGARDVENVLMTQVTGK
LAEWVLE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggaactggccagcctgatcggacgcctcaacccggacaatcgccgagccctggaaagg
gccgcgcaacgttgcctgcaacgcagccaccactacgtggaaatcgaacacctgctgttg
gaattgctggacatcgaaggcggagacttcgcctgcctgttgccgcgcttcggtcttgaa
cgtgatgcggtggcggcggaaaccaacaaggcgctggacttgttcaaatccggcagcacc
cgcacgcctgccctgtcggcgcaaaccatcggcctgttggaagatgccgtggtccaggcc
agcgtgttgggcctggacagcatccgctccgggcttttactgctggcactgctggaccgt
gatgagcgccgcagcctgctgctcaacagcgcctcgtccctgctgcgcatcccccgcgat
gccctgcgcacccacctattggaatggaccgaaagctcccgtgagcatgtcgctggcatg
cgcccggccaaacccggcgagcctccccagaaacaggacccggtcctggaccagtacacc
caggacctgaccgcagacgcaagggccgggcgcatcgaccccatcgtcggccgcgacggc
gagatccgccaatgcatcgacatcctgctccgacgtcggcagaacaacccgatcctggtg
ggcgcgccgggtgtcggcaagaccgccgtggtggagggcctggccctgcgcatcgctgcc
ggggatgtgccgccgtcgttgcaggaagtcacgctgcgggtcctcgacctcggcctgttg
caagccggcgcgggcgtcaagggcgagttcgaacagcgcctcaagggcgtgatcgatgcg
gtccgcagcgcggaaaaaccgatcatcctgttcatcgacgaagcccatacgctgattggc
gcgggcggtgccgagggtggcagcgacgcggccaatttgctaaagccagccctggcccgg
ggcgagttgcgcaccctggccgccacaacctggctggagtacaagaagtacttcgagaaa
gacccggccctggcccgccgcttccagttggtccaggtcgaagagccggacgagctcacc
gccgttgaaatgctccgtggcgtggcgagcaaactggaacagcaccacggcgtgcaggtg
ctggacgcagccatccatgaggcagtgaagctgtcccaccgctatatctccgggcgccag
ttgccggacaaagccatcagcgtgctggacaccgcctgcgcccgggtcgccctcggccag
cacgacgtaccgccgccgctggaaagcctgcgccatcggcagaacagcctcaaggatgaa
gtcgaacgcctgcgccgggaacaggccaccggactggaccatcgcgagcgcatcaccctg
ctggagggcgagtcggccagcaacgtgcaggccatccgcgaactggaaacccgttggggc
gaagaacgcgaggccgtgcgcgaactgctcgacacccgccgcgaactgctcgccttgagc
gagcgcgccgacagtgaaaaagccgacaccgagattgataaccgaatcgaccacctggcc
gccgaactgctgcgcctggaggccggcctcgatgccattcgccaggacgacccgctggtg
cccgaacaggtggacagcaagaccgtcgccgcggtgatcgccggctggaccggcatcccg
gtcggcaagatgctcgccgacgaagcccacgccgtgcgcaccctcggccaacgcatgggc
cagcgagtcatgggccagggcaccgcgctgaacaccatcgcccaacgcctgcaagcctac
cgcgccggcctcaccgacccgcagaaaccggtcggcgtgtttttgttggtgggtcccacc
ggcgtgggcaagaccgaaaccgcctacgccctggccgatgccttgtacggcggtgaacgc
aacctgatcagcatcaacctctcggagtaccaggaagcccacaccgtcagccaactcaag
ggcgccccgcccggctacgtcggctatggcagcggcggcgtgctcaccgaagcggtgcgg
cgcaagccctattccgtggtgctactggatgaaatcgaaaaggcccacccggacgtgctc
gaagccttctacaacgttttcgacaaaggcctgatggaagacggcaccggcctggtggtg
gacttcaagaacacggtgatgctcgccaccagcaacgtcggtgccgaactgctgctggat
acgccggtcgcgcagttgggcagcgatgccttcaacgaagcgttgcacaaggtgttgctg
caagcgttccgtccggcgtttttggcgcggatgacggtggtggcgtaccggccgctggat
gaagcgacgctggaagggatcgtgctggcgaagctggagaaattgcgcgggcgctacaag
gccgcgacgggcaagcagttcgagttcgacgccgggatcgtcaaggcggtattggccaag
tgcagcgccgccggggcgcgggatgtcgagaacgtgctgatgacgcaggtgacggggaag
ttggcggagtgggtgttggagtaa
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