Pseudomonas alvandae: KSS97_12505
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Entry
KSS97_12505 CDS
T07736
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
palv
Pseudomonas alvandae
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palv03400
]
KSS97_12505
DNA repair and recombination proteins [BR:
palv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KSS97_12505
Archaeal homologous recombinant proteins
KSS97_12505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
MMR_HSR1
NQRA
AAA_15
RsgA_GTPase
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QXI55713
LinkDB
All DBs
Position
complement(2793369..2797010)
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDADGEIATGDPRTLLRRGTGDGYAEVDFRGIDGRRYRARWEANRAREKA
AGKLQASRQSLRDLDNDQLLASQKGEYKAQLEAALGLNFEQFTRAVLLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTRLGRRAFDKAKQAKETHKQLQDQASGVTPLAPEARADLDERV
NQAQQALKTQQAQLKQLEQQQTWLKDLRQLQDEQASAAEQLQQAQADWEAQADERLKLVR
LEQLAPQRHQFIRQAELARQFEPLAIKIQQLTQQQVELHEQQGELEKGLGVAQLALVATR
QQSTDNAPLLRQAFDEQSSLARLNQEAGQRAEQLQQAQLACTDGQRTLDSLLEQQRQVGE
RLQRIAAELEQSTGLAPLSDAWGAYRDRLQQLMLIGNRLNKGQDELALLEQNAARAAEDL
ATRRQDLEVLYKEADAEPQAVAEQIQLLGNLLQDNRKQLRAFEELARLWASQQELDKRSA
ELEQRQQRALQERDRLVREGGEAKAELTIAEQTLTVTRELLERQRLARSESVEQLREQLQ
DNQPCPVCGSVEHPYHQPEALLESLGRFDESEQANARKAVELLNEKVIDLRAQYSGVIAQ
LKEFKQQQEQLATQHQGLAPSLEAHPLSAQMFAQDSPKRDAWLAQQTSQLQLRISQDEQR
QAALLTLQQDAARLTQQLRDAETANQQASQHLSNQQQELARDRQRLDEELEHFSALLPAD
TLQALRSEPAATFMALDQRISQRLAQSEQQREELAEQLQRQQALEKEQDRQQLRVQQLES
AQQQFNALAEQQQACQEKLTQLLGEYSSAEQWQQQLDVALEQARQAEASANQQLQDLRNN
LVQLAAELKARQEQAQALEAEQQTLAAGIAQWRASHSELDNAALDALLSLDEQQVAQLRQ
RLLNSEKAIEQARVLLTERELRLHNHQAQDNGNLPAEQLADALATLHEQFTASEQQCADL
RAEQAEDQRRQNANQALAQQIEQAYTEYQRWARLDALIGSATGDRFRKLAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSTVEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgccatccgcctcaagaaccttgcgtccctggctgggccatttgaaatc
gatttcaccgccgagccgctggccagcgccggcctgttcgctatcaccggccccacgggc
gcgggcaagagcacgctgctggatgccttgtgcctggcgttgttcggcgcggtgccgcgc
ctgaacaacaccgggcgggacgccaaggtgccggacgccgacggtgaaatcgccacgggc
gatccgcgcacgctgttacgccgtggcaccggcgacggttatgccgaagtggattttcgc
ggcatcgacggtcgccgctaccgggcccgctgggaggccaatcgcgcccgggaaaaagcc
gccggcaagctgcaggccagccgccagagcctgcgggacctggacaacgaccagctattg
gccagccagaaaggcgaatacaaggctcaacttgaagccgccctcggcctgaatttcgaa
cagttcacccgcgccgtgctgctggcacagagcgagttcagtgcgtttctcaaggccgat
gacaacgaccgcagcgaactgctggaaaaactcaccgacaccgccctgtatacccgcctc
ggccgccgcgccttcgacaaggccaagcaggccaaggaaacccacaagcagctgcaggac
caggccagcggcgtcacgcccctggctcccgaggcccgcgccgacctggacgagcgcgtg
aaccaggcccagcaagcactcaagacccaacaggcgcagctcaagcaactggagcagcaa
caaacctggttgaaggacctgcgccagttacaggacgaacaggccagcgccgccgagcaa
ctgcaacaagcccaagccgattgggaagcgcaggccgatgaacgcctgaagctggtccgc
ctggaacaactggcgccgcagcggcatcagttcatccggcaggcggaactggcccggcag
ttcgagccactggcgatcaagatccagcagctgacccagcagcaagtcgagttgcatgaa
caacagggcgaattggaaaaaggcctgggcgtggcgcaactggcactggtcgcgacccgc
cagcagagcaccgacaacgcgcccctgctgcgccaggcgttcgatgaacaaagcagcctc
gctcgcctgaaccaggaagccggccagcgcgccgagcagctgcaacaggcccaactggct
tgcaccgacggccagcgtaccctcgactccctactggaacagcagcgacaggtgggcgaa
cgcctgcaacggatcgccgcagaactggaacaaagcaccgggctcgcaccactgagcgat
gcctggggtgcctatcgcgaccgccttcaacaattgatgctgatcggcaatcggctgaac
aagggccaggacgaactggcgctgctggagcaaaacgcggcgcgtgccgccgaggacctt
gcaacccgtcgccaagaccttgaagtgctctacaaggaggccgacgccgaaccgcaggcg
gtggccgaacagatccagttgctcggcaacctcttgcaggacaaccgcaagcaactgcgc
gctttcgaggaactggctcggttgtgggccagccagcaggaactggacaaacgcagcgcg
gaacttgagcaacgtcagcagcgcgccttgcaggaacgcgaccgactggtgcgcgaaggc
ggcgaagccaaggccgagctgacgatcgccgaacagaccctgaccgtgacccgcgaactg
ctggagcgccagcgcctggcccgcagcgaaagcgtcgagcaactgcgcgaacaactgcaa
gacaaccagccctgcccggtgtgcggcagcgtcgaacatccttaccatcagcccgaagca
ctgctggaaagcctcggtcgcttcgatgaaagcgaacaggccaacgcccgcaaagcggtg
gagctgctcaacgaaaaagtcatcgatctcagggcgcaatacagcggcgtcatcgcccag
ctcaaggaattcaagcaacagcaggaacaactcgccacccagcatcagggcctggcgcca
agccttgaagcccacccgttgtcggcgcagatgttcgcccaggattcgcccaagcgcgac
gcctggctggcccagcaaaccagccaactgcagctgcgcatcagccaggacgaacaacgc
caggctgccctgctcaccctgcaacaggacgccgcgcggctgacccagcaactgcgcgat
gcagagacagccaaccaacaagcgtcgcagcacctgagcaaccagcaacaggaattggcc
cgggatcgccagcgcctggacgaggagctcgagcacttcagcgcgctgttgccggccgac
accttgcaggccctgcgcagcgaaccggccgccacgttcatggcacttgaccaacggatc
agccagcgcctcgcgcaatcggaacagcaacgcgaagaactcgccgagcaacttcagcgc
cagcaagccttggagaaagagcaggatcgccagcagctccgcgtgcagcaattggaatcg
gcacagcagcagttcaatgctctggccgaacagcaacaggcctgccaggaaaaactcaca
caactgctgggcgaatactccagcgccgaacaatggcagcagcagctcgacgtggcgctg
gaacaggctcgtcaggccgaggccagcgccaatcaacagttgcaggacctgcgtaacaac
ctcgtgcaactggcggccgaactcaaggcccggcaggaacaggcccaggcgctggaggcc
gaacagcaaacgttggccgcgggcatcgcccaatggcgcgcctctcactcggaactggac
aacgcggcgctcgacgccctgctcagccttgacgagcaacaagtggcgcagttgcgacaa
cgcctgctcaacagcgaaaaagccatcgagcaggcccgcgtactgctcaccgaacgggag
ctgcgcctgcacaatcaccaggcgcaagacaacggcaacctgccggccgaacagttggct
gatgccctcgccacgctgcatgagcaatttaccgccagtgaacaacagtgtgcggacttg
cgcgccgagcaagccgaggaccagcgtcgacagaacgccaaccaggccctcgcccagcag
atcgagcaggcctacaccgagtaccagcgctgggcacgcctggatgcgctgatcggctca
gccaccggcgaccgcttccgcaaactggcccaggcgtacaacctcgatttgctggtgcac
cacgccaacgcccagttgcggcaattggttcgccgctaccgcctcaagcgcggcggcagc
atgctcgggctgctggtgatggacaccgaaatgggtgacgaactgcgctcggtgcattcg
ttgtccggcggcgaaaccttcctcgtttccctcgccctggcgctgggcctggcgtcgatg
gcgtccagcacgctgagaatcgagtcgctgttcatcgacgaaggtttcggcagcctcgac
ccggagtcgctgcaactggcgatggatgccctcgatggcttgcaggcccagggccgcaag
gtcgcggttatctcccacgtgcaggaaatgcacgagcggatcccggtgcagattcaggtg
cgccgccagggcaacgggttgagcacggtggaggtgaaatga
DBGET
integrated database retrieval system
