Pseudomonas alvandae SWRI17: KSS97_13665
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Entry
KSS97_13665 CDS
T07736
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
palv
Pseudomonas alvandae SWRI17
Pathway
palv02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KSS97_13665 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
palv02044
]
KSS97_13665 (tssC)
Secretion system [BR:
palv02044
]
Type VI secretion system
Imp/Vas secretion system core components
KSS97_13665 (tssC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
DUF3135
Motif
Other DBs
NCBI-ProteinID:
QXI55930
UniProt:
A0ABX8QKK2
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Position
3051416..3052951
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AA seq
511 aa
AA seq
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MSTESSNVQSRGATVLAEDKGVYAALFSKINLNPVAELGSIETFQHAEALSEASVDERVT
AAVSVFLKLLKESPQKVERLDKVLLDEHIASLDTQISRQLDAVMHHPDFQRVESTWRGVK
SLIDQTDFRQNVRIELLDISKTDLVRDFEDAPEIAQSGLYLHTYTREYDTPGGEPIAAAI
SNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKQSMEEVAAIKDIGNYFDRAE
YIKWKAFRDSDDARYVGLTMPRVLGRLPYGPDTIPVRSFNYVESVKGPDHDKYLWTNASF
AFAANMVKSFIANGWCVQIRGPQSGGAVTDLPIHLYDLGTGNQVKIPSEVMIPETREFEF
ANLGFIPLSYYKNRDYACFFSASSAQKPALYDTPDATANSRINARLPYIFLLSRIAHYLK
LIQRENIGTTKDRRLLELELNKWIGGLVTEMTDPGDALQASHPLRDAKVTVEDIEDNPGF
FRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgaaagttctaacgtgcaatcgcgcggcgctacagtgttggctgaagacaag
ggcgtttatgcggcgctgttcagcaagataaatttgaaccctgtcgctgagctgggaagt
atcgaaactttccagcacgccgaggcgttgtccgaggcatcggttgatgaacgggtcacc
gccgcggtcagcgtgttcctgaagttgctcaaggaatcaccgcagaaagtggagcgattg
gacaaagtgctcctcgacgagcatatcgcttcgctggacacgcagatcagtcgtcaactc
gatgcggtcatgcatcacccggacttccaacgcgtcgaatcaacctggcgcggcgtcaag
tccttgatcgaccagacggattttcgccagaacgtgcgcatcgaattgctggatatcagc
aagactgacctggtgcgggattttgaagacgcccccgaaatcgcccagagcggtttgtac
ctgcacacctacacccgcgaatacgacacgccaggcggggagccaatcgcggccgccatt
tccaattacgaattcgatcgcagcccgcaggacattgccttgctgcgcaatatttcgaaa
gtggccgcggcggcgcacatgccctttatcggttcggtggggccggcattctttggcaag
caatccatggaggaggtggccgccatcaaggacatcggcaattacttcgatcgagccgag
tacatcaagtggaaggccttccgtgacagtgacgatgcgcgttacgtcggcctgaccatg
ccgcgggtcctggggcgcctgccctatgggccggatacgattcccgtgcgcagcttcaac
tacgtcgaaagcgtcaagggccctgatcacgacaagtatttgtggaccaacgcgtccttc
gcgtttgccgccaacatggtcaagagctttatcgccaatggttggtgcgtgcagattcgt
gggcctcagtcggggggcgcggtcacggacctgccgatccacttgtatgacctgggtacc
ggcaaccaggtcaagattccttcggaggtgatgatcccggaaacccgcgagttcgaattc
gccaatctcggcttcattcccctgtcgtattacaagaaccgcgactacgcctgtttcttc
tccgccagttcagcccagaagcctgcgttgtacgacacgccggatgccaccgccaacagc
cgcatcaatgcgcgcctgccttatatcttcttgctctcgcgcattgcccattacctgaaa
ttgatccagcgcgaaaacatcgggaccaccaaggaccgtcgcttgctggagttggaactc
aataaatggatcggcgggctggtgaccgaaatgaccgatcccggcgatgccctgcaggcc
tcgcaccccctgcgtgatgccaaggtgacggtggaagacatcgaggacaaccccggtttc
ttccgggtcaagttgtacgccgtgccgcactttcaggtggagggcatggacgtcaacctg
tcgctggtttcgcaaatgcccaaggcgaaagcctga
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