Pseudomonas alvandae SWRI17: KSS97_14000
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Entry
KSS97_14000 CDS
T07736
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
palv
Pseudomonas alvandae SWRI17
Pathway
palv01501
beta-Lactam resistance
palv02020
Two-component system
Module
palv_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KSS97_14000
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KSS97_14000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
palv02000
]
KSS97_14000
01504 Antimicrobial resistance genes [BR:
palv01504
]
KSS97_14000
Transporters [BR:
palv02000
]
Other transporters
Pores ion channels [TC:
1
]
KSS97_14000
Antimicrobial resistance genes [BR:
palv01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
KSS97_14000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
QXI55991
LinkDB
All DBs
Position
complement(3134460..3135809)
Genome browser
AA seq
449 aa
AA seq
DB search
MPPASKNTCAARQTTTASKPLLLLALLAGHAPAMAAQTASGFLDGASLEVLSRNFYLNND
YRSPSPSGKNYKQEWAQGFIATFESGFTPGTVGVGVDAHGFLGLKLDGGKGHAGTGLLPL
DDDGRSEDEYSSAGGALKLKVSRTTLALGEMTVATPVFDTADKRLQPEYASGALLTSREF
DEVDLQAGHFNAFKNQDASTARGDFSGYGATTRHASIDFIGADLFSGRTVGGALYASELS
DTWRQYYGNLHSTVGDLFLDGNLYYTRDHGQASAGSIDNTAFSLSGKYRLDAQAFTLAYQ
KVHGDTPFDFVGGDSIYLANSIKYADFNGPGERSWQARYDFDLGALGIPGLNFMARYVRG
SGIDGSHSPQGGAYNPFDSDSATFSPQQGDGGRHWERDLDLRYIVPSGPAKDLSLQLSHV
THRANSAQAGDDIDRVYIVIQYPLKLGPF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgcctcaaaaaacacctgcgcagccaggcaaacgacaaccgcttcgaagccg
ctcctgctcctcgccttgctcgccgggcatgccccggcgatggccgcacaaaccgcgtcg
ggattcctggacggggcatcgctggaggtcctcagccgtaacttctacctcaataacgac
taccgctccccgagcccgtcgggcaagaactacaagcaggaatgggcccagggattcatc
gccacattcgagtcgggcttcacgccgggcaccgtcggcgtaggcgtcgacgcccatggt
ttcctgggtttgaagctggacggtggcaagggccatgccggcaccgggttgttgccgctg
gacgatgacggtcgcagcgaggatgaatattccagtgcgggcggcgcgctgaaactcaag
gtatcgcgcaccaccctggcactcggtgaaatgaccgtggcgacaccggtattcgataca
gcggacaaacgcctgcaaccggaatacgccagcggcgcgctgctcaccagtcgggaattc
gatgaggtcgatttgcaggccggccatttcaatgcgttcaagaatcaggacgcgtccacc
gccaggggcgatttttccggctacggggcaaccacccgccacgccagcatcgacttcatc
ggcgccgatctgttcagcggccgcacggtgggcggcgcgctctatgcctcggaactgagc
gacacctggcgccagtactacggcaacctgcattcgacggttggcgacctgttcctggac
ggcaacctgtattacacccgcgaccatggtcaggccagtgcaggcagcatcgacaacacc
gctttcagcctctccggcaaataccggctcgacgcccaggcgttcaccctggcctatcag
aaagtccacggcgacacgcctttcgatttcgtcggtggcgactccatctacctcgccaac
tcgatcaagtatgccgatttcaacggcccgggcgagcgttcctggcaagcgcgctacgac
ttcgatctgggcgccttaggcatccccggcctgaatttcatggcccgctacgtgagggga
agcggtatcgatggcagccattccccccaaggcggcgcctacaatccgttcgacagcgac
tccgcaaccttcagcccgcaacagggcgacggcggtcgccattgggaacgcgacctcgat
ctgcgctacatcgtgccgtcaggcccggccaaggacctgtcgctgcagctctcccacgtc
acccaccgcgccaacagcgcccaggccggcgatgacatcgacagggtgtacatcgtcatt
caatacccgctcaaactgggaccgttctga
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