Pseudomonas alvandae SWRI17: KSS97_14330
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Entry
KSS97_14330 CDS
T07736
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
palv
Pseudomonas alvandae SWRI17
Pathway
palv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KSS97_14330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palv03400
]
KSS97_14330
DNA repair and recombination proteins [BR:
palv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KSS97_14330
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KSS97_14330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
nSTAND1
SMC_N
DnaJ_CXXCXGXG
AAA_29
AAA_16
AAA_25
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QXI50739
LinkDB
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Position
complement(3214070..3216706)
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AA seq
878 aa
AA seq
DB search
MPPRFPPASAAGTGFVRVRGAREHNLKNVDVDIPRDALVVFTGVSGSGKSSLAFSTLYAE
AQRRYFESVAPYARRLIDQVGVPDVDSIEGLPPAVALQQQRGTPSARSSVGSVTTLSSLI
RMLYSRAGSYPADQPMLYAEDFSPNTPQGACPACHGLGRVHEVTEATMVPDPSLTIRERA
VAAWPMAWQGQNLRDILVTLGYDVDIPWRDLPKKQRDWILFTEETPTVPVYAGLTPAQTR
EALKRKLEPSYQGTFSGARRYLLHTFMHSQSAQMRKRVAQYMRASPCPACDGKRLKREAL
TVTFAGLDIAQLSNLSLLELAEVLKAVAAPDYLEQPEEPGDVLTHRQTREAREQRAARGD
NPHAGGPDARHTPNLSLEKRLAAQRIAAELLERIVTLIDLGLGYLALERSTPTLSSGELQ
RLRLATQLNSQLFGVIYVLDEPSAGLHPADSEALFGALQRLKAAGNSVFVVEHDLDTMRR
ADWLIDVGPDAGEQGGKILYSGPPEGLGQVAESKTRAYLFAEEHVTARTPRKTKDWLRLE
GITRNNLDNLSAAFPLGCFTAVTGISGSGKSSLVSQALLDLVGAHLGQPSATVEAEEQSL
EDEPVQASGGQVTAGLERIKRLVQVDQKPIGRTPRSNLATYTGLFDHVRKLFAATEQAQA
LGYDAGRFSFNVAKGRCETCEGEGFVSVELLFMPSVYAPCPTCHGARYNPQTLEVRWEGL
DIAQVLQLTVNQALEVFAEQAAARRSLQVLQDIGLGYLRLGQPATELSGGEAQRIKLATE
LQRKARGATLYVLDEPTNGLHPQDVDRLLVQLNRLVDEGHTVVVVEHDMRVVAQSDWVID
IGPGAGTQGGKVVVSGVPQGVAACEESRTAPFLKNALR
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgcctccacgcttcccccctgcttccgccgctggcaccggtttcgtccgggtgcgtggc
gcccgcgaacacaatctcaagaacgtcgatgtcgacatccctcgcgatgccctggtggtg
ttcaccggcgtgtcgggctccggcaaatcctcgctggctttctccaccctctacgccgaa
gcccagcgtcgctacttcgagtcggtcgcgccttacgcgcggcggctgatcgaccaggtg
ggcgtgcccgacgtggacagcatcgaaggcctgccacccgcggtcgccttgcagcagcaa
cgcggcacgccgagcgcgcggtcctcggtgggcagcgtcaccacgttgtcgagcctgatc
cgcatgctctactcccgcgccggcagttacccggcggaccagccgatgctctatgccgag
gacttctcgcccaacacgccccagggcgcctgcccggcgtgccacggtttgggccgagtc
cacgaagtgaccgaagccacgatggtgcccgacccttcgctgaccatccgcgaacgcgcc
gtggccgcctggcccatggcgtggcaaggccagaacctgcgggacatcctggtgaccctt
ggctatgacgtcgacattccctggcgcgacctaccgaagaaacaacgcgactggatcctc
ttcaccgaagagacgcccactgtcccggtgtacgccgggctcaccccggcccagacccgc
gaagccctcaagcgcaagctcgaacccagctaccaaggcaccttcagcggcgcccggcgc
tacctgctgcacactttcatgcattcgcaaagcgcgcagatgcgcaagcgcgtggcccaa
tacatgcgcgccagcccctgccccgcctgcgacggcaagcgcctcaagcgcgaggcgctg
accgttaccttcgccgggctggacatcgcccagttgtccaacctgtcgttgctggaattg
gccgaagtgctcaaggccgtcgctgcgcccgactatctggagcaacccgaagagccgggc
gatgtgctcacccaccgccagacccgcgaagcccgcgagcaacgcgcagccaggggcgac
aacccgcacgccggcgggcctgacgcgcgccacacgcccaacctgtccctggaaaaacgc
ctggccgcccagcgcattgccgccgaactgctcgaacgcatcgtcacgctgatcgacctc
ggcctcggctacctggccctggagcgcagcacgccgacactgtcctccggcgaactgcaa
cgcctgcgcctggcgacccagctcaattcccagctgttcggcgtgatctacgtgctggac
gaaccctccgccggtttgcacccggccgacagcgaagccctcttcggcgccctgcaacgc
ctgaaggcggcgggcaattcggtgttcgtggtcgagcacgacctggacaccatgcgccgc
gccgactggctcatcgatgtcggccccgacgcgggcgagcaaggtggcaagattctctac
agcggtccgcccgaaggcctggggcaagtggccgagtccaagacccgcgcctacctgttc
gccgaagaacacgtcaccgcgcgaaccccacgcaaaaccaaggattggctgcgcctggaa
ggcatcacccgcaacaacctcgataacctgagcgcggcgtttcccctgggttgcttcacg
gcggtgaccggcatttccggctcgggcaaatcgagcctggtcagccaggccttgctggat
ctggttggcgcgcacctgggccagcccagcgccaccgtcgaggccgaagaacaaagcctg
gaagacgaaccggtgcaggccagcggtggccaagtcaccgccgggctcgaacggataaaa
cgcctggtccaggtcgaccaaaaacccatcggccgcacgccgcgctccaacctcgccacc
tacaccggactgttcgaccacgtgcgcaagctcttcgccgcaaccgaacaggcccaggcc
ttgggatacgacgccgggcgattttccttcaacgtcgccaagggccgttgcgaaacctgc
gaaggcgaaggcttcgtcagcgtggaattgttgttcatgcccagcgtgtacgcaccctgc
ccaacctgccacggcgcccgctacaacccgcagaccctggaagtgcgttgggaaggcctg
gacatcgcccaggtgctgcaactgacggtgaaccaggccctggaagtcttcgccgaacaa
gcggcagcccggcgttcgctacaggtgctgcaggacatcggcctgggctacctgcgcctc
ggccaaccggccaccgaactgtccggcggcgaggcccagcggatcaagctggcgacggaa
ctgcaacgcaaggcccggggcgcgacgctgtacgtgctggacgagcccaccaacggcctg
catccccaggacgtcgatcgtttgctggtgcaactgaatcgcctggtggacgaaggccac
accgtggtggtggtggaacatgacatgcgggtggtggcgcagagcgactgggtcatcgac
atcggcccgggggctgggacgcagggtgggaaggtcgtggtgagcggtgtgccgcagggg
gtggcggcttgcgaggagagccgtacggcaccgtttctgaaaaacgccctgcgctga
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