Pseudomonas alvandae SWRI17: KSS97_15530
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Entry
KSS97_15530 CDS
T07736
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
palv
Pseudomonas alvandae SWRI17
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palv03000
]
KSS97_15530
Transcription factors [BR:
palv03000
]
Prokaryotic type
Helix-turn-helix
Other families
KSS97_15530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
AAA_5
HTH_50
HTH_23
AAA_2
HTH_30
AAA
HVO_A0261_N
HTH_17
NACHT
RWP-RK
HTH_20
AAA_16
HTH_28
PAS
HTH_7
HTH_29
Motif
Other DBs
NCBI-ProteinID:
QXI50968
UniProt:
A0ABX8Q995
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All DBs
Position
3484339..3486204
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AA seq
621 aa
AA seq
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MLSAHSRAHVDCVSRVLKNAARLPQLPVPDLILDSWRRSMEQHHLDPGSLQGPRILSHDV
LKQCRERSELFLNIASDEVARLHGRVRDADYCVLLTDAQGQTIDYRVETTLRNDCRKAGL
YLGTCWSEGEEGTCGVAAVLTAKTAVTVHKRDHFRAAFIGLTCSAAPVFDPQGELLGVLD
VSAVRSPDDRRSQHLIRQMVVQSAREIEQAFFMSSAQGYWVLRAHRNAGYVDSQPDFLLA
WDDDGCLQALNPAARQFLMQRYGQLPQHISQIFDAQLLHRARDESLYPLDVDLHGRLSAP
RRRATPRQRAAMTPTELDPRLADSLTLAVRVKDRNLPVLIQGETGSGKEVFARQLHQASQ
RRDRPFVALNCAAIPESLIESELFGYVAGAFTGASAKGMQGLLQQADGGTLFLDEIGDMP
LALQTRLLRVLAEGEVAPLGASRRKAVDIQVVCATHRDLEALVATGEFREDLYFRLGGAR
FKLPPLRERTDRLALINRILEEESALCGDAVHLSGAALECLLGYHWPGNVRQLRHVLRYA
CAVCEASVIQLSHLPESLHSATAVDHGPEPGASPERQALLDALVRHRWKPTPAARALGIS
RATLYRRVHQHGIEMPGRSPG
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgctttccgctcactcccgggcgcatgtggattgcgtcagccgcgtgctgaagaacgcc
gcccgactgccgcaattgccggtgccggacctgatcctcgactcctggcgccggtccatg
gagcaacatcacctggaccccggctcgctgcagggcccgcggatcctgtcccacgacgtg
ctcaagcagtgccgcgagcgttcggaactgttcctcaatatcgccagcgacgaagtggcg
cgcctgcatggccgggtgcgcgacgccgactattgcgtgctgctgaccgatgcacagggc
cagaccatcgactaccgggtggaaaccacccttcgcaatgactgccgcaaggccgggctc
tacctggggacgtgctggtcggaaggcgaagaaggcacttgcggcgtggcggcggtgctc
acggccaagacggcggtgacggtgcacaagcgcgaccacttccgcgcggcattcattggt
ctgacctgctccgccgcgccggtcttcgatccacaaggggaattgctcggggtgctggac
gtctcggcggtgcgttcgccggatgatcgccgctcgcagcacctgatccggcaaatggtg
gtgcagagcgcccgggaaatcgaacaggcatttttcatgagcagcgcccagggttactgg
gtgctacgggcccatcgcaacgccgggtacgtcgacagccaaccggatttcctgctggcc
tgggacgacgatggctgcctgcaagcgctgaacccggcggcgcgccagttcttgatgcag
cgttacggccagttgcctcagcacatcagccagatcttcgacgcccaattgctgcaccgc
gcccgcgatgaaagcctctatccgcttgatgtcgatttgcatgggcgcttgagcgcgcca
cggcgccgggccacgcctcgccagcgcgccgcgatgacgccgaccgagctcgatccacgc
ctcgccgacagcctgaccctggcggtgcgggtcaaggatcgcaacctgccggtgctgatc
cagggcgagaccggttccggcaaggaagtcttcgcccgccagttgcaccaggcaagccag
cgccgcgaccggcctttcgtggccttgaactgcgcggccataccggaaagcctgatcgag
agcgagttgttcggttatgtggccggtgcctttaccggcgcctcggccaagggtatgcag
ggcctgttgcagcaggccgatggcggcacgctgttcctcgacgaaatcggtgacatgccg
ctggccctgcaaacccgcctgttgcgggtgctggccgagggcgaagtggcgccgttgggg
gcatcgcggcgcaaggccgtggacatccaggtagtttgcgccactcaccgcgacttggag
gccttggtcgcgaccggcgaatttcgcgaggatttgtatttccgcctcggcggtgcccgt
ttcaaactgcctccgctgcgcgaacgcacggaccggctggcgttgatcaatcgcattctg
gaagaagagtcagcactgtgcggcgatgcggtgcacctgagcggcgcggcgctggaatgc
ctgctgggttatcactggccgggcaatgtccgccagttgcggcatgtgctgcgctatgcc
tgcgcggtctgcgaggccagcgtgatccagctcagccacttgcccgagtcattgcacagc
gcgactgccgtcgatcatgggccggagcccggcgccagtcctgaacgccaggcgttgctg
gacgccctggtgcgccatcgctggaaacccaccccggcggcgcgggccctgggcatttcc
cgggcaacgctgtatcgacgggtgcatcagcatggcatcgaaatgcccggccggagtccg
ggctga
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