Pseudomonas alvandae SWRI17: KSS97_16485
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Entry
KSS97_16485 CDS
T07736
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
palv
Pseudomonas alvandae SWRI17
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palv03000
]
KSS97_16485
Transcription factors [BR:
palv03000
]
Prokaryotic type
Helix-turn-helix
Other families
KSS97_16485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
GAF
PAS_4
MCM
AAA
Mg_chelatase
AAA_2
PAS_8
HTH_50
AAA_30
AAA_16
PAS_7
ATPase
SH3_11
Motif
Other DBs
NCBI-ProteinID:
QXI51148
UniProt:
A0ABX8Q9X7
LinkDB
All DBs
Position
complement(3712401..3714401)
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AA seq
666 aa
AA seq
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MNTQPMALNVEDRDYLTALGPASLNGGSSPALDKAWRACLKGVTERPAGVRQVIWNSWRR
SVDAGLDPEDGEYRFVAPAELTETLAANRLLIAAAAQVMRGLLAYNPNGHINLTDAEGTT
LYFCGLDLTPIGSRLLETVQGTNCTGLALVEDRLVYVLAGENFGVGLRQRHMHCAAAPIR
DAHGRTLAMLTLTAEPGWFHFHTLGTVQAAAEAVARQMTLHALLEEQQTVLEVLNEGLVV
LDENGDIKALNHYARQLFRVDPAWLGKPFQSLGQTELSGEILRSTGEGVRDLDCTFELHD
RSHLACLVSVCPLEQGGRVVSLRENRRIREITRRIIGTQASYTFETIQGHSRAIQDALHL
GRIASRSDSTTLILGESGTGKELFAQAIHNASERRGGPFVAVNCGAIPRDLVQSELFGHV
EGAFTGSARGGSAGKFELADGGTIFLDEIGDMSFDAQVSLLRVLQEGEITRVGAKKSLRV
NVRIIAATHRNLSQAVAEGAFREDLYYRLNVLGLTVPPLRMRLEDVPMLARHFLARCARS
LRKPMRDLSAEALERLGAYHWPGNVRELENVIERATNLAATELIQATDLALDIRQGGQPL
ARHSAPAPRAAVDLGTHEMNAIIAALRDTRGNIRLAARQLNVSRGGLYNKMSRFGLKVEA
FRSGLD
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacagccgatggccttgaacgttgaagaccgtgactacctgaccgcccttggc
cccgcgtcgttgaatggcggatcaagcccggcgctggataaggcctggcgcgcctgcttg
aagggcgtcaccgagcgtcccgcgggtgtcaggcaggtgatctggaactcctggcggcgc
agcgtcgatgccggcctcgatccggaggacggcgagtaccgtttcgtcgcgcccgctgag
ttgaccgagacgctggcggcgaatcgactgttgattgccgcggcggcgcaggtcatgcgc
ggcttgcttgcctacaaccccaacgggcatatcaacctgacggatgccgaaggcaccacc
ttgtacttctgcggcctggacctcacgcccatcggcagtcggttgctggagacggtacaa
ggcaccaactgcaccggactggcgctggttgaagaccgtctggtgtatgtgctggctggc
gagaacttcggtgtaggcctgcgccagcggcatatgcattgcgccgccgcgccgatccgc
gacgcccacggtcggacgctggcgatgttgaccttgaccgccgaacccggctggtttcac
ttccacacgttgggcaccgtccaggccgcggccgaagccgtcgcccggcaaatgacgctg
catgcgttgctggaagaacagcaaacggtcctggaagtgctcaacgaaggcttggtggtg
ttggacgaaaacggcgacatcaaggccctcaaccattacgcccggcagttgtttcgtgtc
gaccctgcctggctgggcaagccgttccagagcctggggcagaccgaactgagcggtgaa
atcctgcgcagcaccggggaaggggtgcgggacctggactgcacgttcgagctgcacgat
cgaagccacctcgcctgcctggtgtcggtctgtccgctggagcagggcggtcgcgttgtt
tcgttgcgcgagaaccggcgcatccgcgaaatcacccgccgcatcatcggcacccaggcc
agctacaccttcgaaaccatccagggccattcacgcgctatccaggacgcgttgcacctg
ggccgaatcgccagccgcagcgactcgaccacgctgattctcggtgagagcggcactggc
aaggagctgttcgcccaagccatccacaatgccagcgagcgtcgcggcgggcctttcgtc
gcagtgaattgcggcgccattccccgcgacctggtgcagagcgaactgttcggccacgtc
gaaggcgcgttcaccggatcggcgcgcggcggctcggcgggcaagttcgaactggcggac
ggcgggacgattttcctcgacgagatcggtgacatgtccttcgatgcgcaagtcagcttg
ctacgcgtcctgcaggaaggcgaaatcacccgcgtgggggcgaagaaatcgttgcgggtc
aacgtccgcatcattgccgcgacccaccgcaacctgagccaggccgtggccgaaggcgcc
tttcgcgaggacctttactaccgactcaacgtgctgggcctgacggtgccgcccctgcgg
atgcgccttgaagatgtgccgatgctggcacggcattttctcgcgcgttgcgcccggtcg
ctgaggaaacccatgcgcgacctgtcagccgaggcgctggaacgcttgggcgcgtaccac
tggccgggcaatgtccgcgaactggaaaacgtcatcgagcgcgcgaccaacctggccgcc
accgagctgatccaggcgaccgatcttgcactggacatcaggcagggaggccagccgttg
gcgcggcattccgctcccgcgccacgagcggccgtggatcttggcacccatgaaatgaac
gcgattatcgccgccctcagggacacgcgaggcaatatccgcctggccgcccgacagttg
aacgtgtcccgtggcggtttgtacaacaagatgagccgattcgggctcaaggtcgaagcg
ttccgttcgggattggactga
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