Pseudomonas alvandae SWRI17: KSS97_17240
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Entry
KSS97_17240 CDS
T07736
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
palv
Pseudomonas alvandae SWRI17
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palv03000
]
KSS97_17240
Transcription factors [BR:
palv03000
]
Prokaryotic type
Helix-turn-helix
Other families
KSS97_17240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_23
HTH_7
HTH_AraC
Mg_chelatase
HTH_30
DUF815
AAA_16
AAA
HTH_50
HTH_28
TIP49
HTH_1
RWP-RK
AAA_7
PAS
HTH_11
Mga
Motif
Other DBs
NCBI-ProteinID:
QXI51286
UniProt:
A0ABX8Q7P1
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All DBs
Position
3908013..3909956
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AA seq
647 aa
AA seq
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MTLHSAQPIPSELAAFVNDHFSGRGLKPDGVIAQSWYRSVVEHRLDPGAASRKNILSAED
IRRHQEQHQQYLSIASQGVSGLARRVVPAGFAVLLSDERGITLDSRLPDQPDIYTQSGLV
VGAQWEESVVGTNGIGTTLAAAQPLIIHREEHFLASNFGLSCSVAPIFDAQGLLRGCLNA
TCMNSAGPRESQYLTLQLVIMYARLIENAHFRQSYRDRLTLSLKPLDEIADLANEQLLAL
DESGRIIGANRAAFVALDLAEGPALLGTVIDRLLPTTVDELLKLTNGGAQGVRLRGLRDE
ALLEVGLRIPSQQHRPRPVARPAPDAHPDLQQLAGLDPQLQQSVHRVRKVIDKGIPILIT
GETGTGKEAFARAIHHASLRRAGPFVALNCAAIPETLIESELFGYRAGSFTGANRKGMKG
KLELANGGTLFLDEIGDMPAHLQTRLLRVLAEREIAPLGAEVPVALDIQVISATHQDLPT
MIGEKRFREDLFYRLAGMNLALPALRERSDRAALIEQLLAAQDETRALRLKADARQCLLD
YHWPGNIRQLLNSLRYAVALAENGVIDLDCLPSEVLAPQRLSLSANTTPLAVSLGEQLGD
EESRRLLATLRQHRWNISAAATDLGISRSTLYRKMKKHGVVAPNDQF
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgcacagcgcgcagccgatccccagcgaactggcggccttcgtcaacgaccat
ttttccggacgcggcctgaagcccgatggcgtcatcgcccagtcctggtaccgcagcgtc
gtggagcaccggctcgatcccggtgcggcgagccgcaagaacatcctcagcgccgaggat
atccggcgtcatcaggaacaacaccagcagtatctttccatcgccagccagggcgtcagc
ggtctggcccggcgcgtggtgcccgccggctttgccgtgctgctgagcgacgagcgcggc
atcaccctggactcccggctgcccgaccagcccgacatctatacgcaatcagggctggtg
gtgggtgcgcagtgggaggaatcggtggtgggcaccaatggcattggcacaacgctggct
gccgcgcagccattgatcattcatcgggaggagcatttcctggcgtccaatttcggcctg
agctgttcggtagcgcccattttcgatgcacagggcctgctgcgcggctgcctgaacgcg
acctgcatgaacagcgcaggccctcgggaaagccaatacctgacgctgcaactggtgatc
atgtatgcgcgcctgatcgaaaatgcacatttccgccagagctaccgcgaccgcttgacc
ttgtccctcaagcccctcgatgaaatcgccgacttggccaacgaacagttactggcgctt
gatgaaagcggtcgcatcatcggcgccaaccgtgccgcctttgtcgccctggacttggct
gagggtccggcactgctgggcaccgtcatcgatcgcctgctgccaaccacggtggacgag
ctgctcaaactcaccaacggtggcgcccaaggcgtgcgtttgcgtggtctgcgggatgag
gcgttgctggaggtcggcctgcggatcccgtctcaacagcaccgcccccgccccgtcgcc
cgccctgcccctgacgcacacccggacctgcaacaactcgccggcctcgacccccaactg
caacagagcgtccaccgggtgcgcaaggtgatcgacaaaggcatcccgattttgattacc
ggcgagaccggcaccggcaaggaagcctttgcccgcgcgatccaccacgccagccttcgt
cgcgctgggcctttcgtcgcactcaattgcgcagccattccggagaccctgatcgagagc
gagctgttcggctatcgcgccggcagctttaccggcgcgaaccgaaaaggcatgaagggc
aagttggaactggcgaatggcggcacgctgtttctcgatgaaattggcgacatgcccgcc
catttgcaaacccgcttgctaagggtgctggcggagcgggaaatcgcgccgctgggggct
gaagtgccggtggcgctggacatccaggtgatctcggcgactcaccaggacctgcccacg
atgatcggcgagaagcgctttcgcgaagatctgttctatcggctcgccggcatgaacctg
gcgctgcccgccttgcgcgaacgcagtgaccgcgccgcgctgatcgagcaactgctcgcg
gcacaggacgaaacccgcgcgctacgactgaaagcggatgcccgtcagtgcctgctcgac
taccactggcccggcaatatccgccaactcctcaatagcctgcgctacgcggtggccctg
gctgaaaacggcgttatcgacctggactgcttgcccagcgaagtgctggcgccacagcgc
ctgtcactgtccgccaacaccacaccgttggccgtcagcttgggcgaacagctgggcgac
gaagagtcccgtcgcctgctggcaaccctgcgccagcatcgctggaacatcagtgccgcc
gctaccgacctgggcatctcccgctccacgctgtaccgcaagatgaaaaagcatggcgtc
gtcgcgcccaacgaccagttctga
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