Pseudomonas alvandae SWRI17: KSS97_19910
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Entry
KSS97_19910 CDS
T07736
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
palv
Pseudomonas alvandae SWRI17
Pathway
palv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KSS97_19910 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palv03400
]
KSS97_19910 (uvrB)
DNA repair and recombination proteins [BR:
palv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KSS97_19910 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KSS97_19910 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
AAA_30
HAMP
Motif
Other DBs
NCBI-ProteinID:
QXI51784
UniProt:
A0ABX8Q8P3
LinkDB
All DBs
Position
complement(4486117..4488132)
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESISAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLDAIEGIKVELQERLEYLRSNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWESVSPQTIFVSATPGNYEAEHAGRVVEQVVRPTGLVDPQ
VEVRPALTQVDDLLSEITKRVALEERVLVTTLTKRMAEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRMTGSMERAIGETERRRDKQIAFNLANGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEESARYEAELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQLRDE
IGKLRERLLAV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattccagctcgtcactcgcttccagcccgccggcgaccagccagaagccatc
cgcctgatggtcgaaggcatcgaggccgggttggcgcaccagacattgctcggtgtaacc
ggctcgggcaagaccttcagcatcgccaacgtgatcgcccaggtgcagcgaccgactttg
gtgctggcgccgaacaagaccctggcggcgcagttgtacggcgagttcaaggcgtttttc
ccgaacaacgccgtggaatacttcgtttcctactacgactactaccagcccgaagcgtat
gtgccgtcgtcggacaccttcatcgagaaagacgcctcgatcaacgaccacatcgaacag
atgcggctgtcagcgaccaaggcactgctcgaacgcaaggacgcgatcatcgtcaccacg
gtgtcgtgcatctacggcttgggcagcccggaaacctacctgaaaatggtgctgcacgtg
gaccgcggcgacaaactcgaccagcgcgccttgctccggcgcctggcggacttgcagtac
acccgcaacgacatggatttcgcccgggcgacgttccgggtgcgcggcgatgtgatcgac
atctacccggcggaatcggacctggaagcgatccgcatcgagctgttcgacgatgaagtc
gagagcatctcggcgttcgacccgctgaccggcgaagtgatccgcaagttgccacgcttc
accttctaccccaagagccactacgtgacgccccgggaaaccctgctggacgccatcgag
gggatcaaggtcgagttgcaggagcgcctggagtatctgcgttcgaacaacaagttggtg
gaagcccagcgtctggagcagcggacccggttcgacctggagatgatcctggaactgggc
tactgcaacggcatcgagaactactcgcgctacctgtcgggccgtccggcgggtgcgccg
ccgccgaccttgtatgactacctgccgcctgacgccttgctggtgatcgacgaatcccac
gtcagcgtgcctcaggtcggcgccatgtacaaaggcgaccgttcgcgcaaggaaaccctg
gtggaatacggtttccgcctgccttcggcactggacaaccggccgatgcgcttcgacgaa
tgggaaagcgtcagcccgcagacgatttttgtctcggccacccctggcaactacgaagcc
gagcatgccgggcgggtggtcgagcaggtggtacggccgaccggcctggtcgacccgcaa
gtcgaggtgcgtccggcgctgacccaggtcgacgacctgttgtcggaaatcaccaagcgc
gtggcgctggaggaacgggtgctggtcaccacgctgaccaagcgcatggccgaagacctc
accgactacctggccgaccatggcgtgcgggtgcgttacctgcactcggacatcgacacc
gtggagcgggtcgagatcatccgcgacctgcgcttgggcaccttcgacgtgctggtgggc
attaacctgctgcgtgaaggcctggacatgcccgaggtgtcgctggtggcgatccttgac
gcagacaaggaaggtttcctgcgttccgagcgctcgttgatccagaccatcggccgcgcg
gcgcgtaacctcaatggccgcgcgattctgtatgccgaccgcatgaccggttccatggag
cgggccatcggcgagaccgagcgccgccgcgacaagcagatcgccttcaacctggccaat
ggcatcacccctaaaggtgtgttcaaggacgtcgccgacatcatggaaggcgccaccgtg
cccggctcgcgcagcaagaagcgcaagggcatggccaaggccgccgaagagagcgcccgc
tacgaggccgaactgcgctcgccgagcgaaatcaccaagcgaatccggcagttggaagag
aagatgtaccaactggctcgggacctggagttcgaggcggcggcgcaattgcgcgatgag
attggcaagttgcgggagcggttgctggctgtctga
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