Pseudomonas alvandae SWRI17: KSS97_21145
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Entry
KSS97_21145 CDS
T07736
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
palv
Pseudomonas alvandae SWRI17
Pathway
palv02020
Two-component system
palv02025
Biofilm formation - Pseudomonas aeruginosa
palv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KSS97_21145
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
KSS97_21145
02025 Biofilm formation - Pseudomonas aeruginosa
KSS97_21145
09142 Cell motility
02040 Flagellar assembly
KSS97_21145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palv03000
]
KSS97_21145
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
palv02035
]
KSS97_21145
Transcription factors [BR:
palv03000
]
Prokaryotic type
Helix-turn-helix
Other families
KSS97_21145
Bacterial motility proteins [BR:
palv02035
]
Flagellar system
Flagellar assembly proteins
Others
KSS97_21145
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_7
nSTAND3
AAA_22
AAA
bpMoxR
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QXI52017
UniProt:
A0ABX8QB35
LinkDB
All DBs
Position
complement(4788273..4789748)
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AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSVRRRDLAVILNFLGEENLPCGSHDWQQAVGSLSSSREVICVLIGTV
NAPASLLGLLKTLSTWDEFLPVLLMGENSSLDLPEDQRRRVLSTLEMPPSYSKLLDSLHR
AQVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRREAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSVDVRIIAATHKNLESMIEVGSFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVAELPKKFRYVDDEDEQMVDSLRSDLEERVAINGHTPD
FTSNALLPPEGLDLKDYLGGLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRREGDEQADD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaattctcctgatcgatgacgatagcgtccgccgccgtgacctg
gcggtgatccttaattttcttggcgaagaaaatttgccctgcggcagccatgactggcag
caggccgtcggctctttgtcctccagccgtgaagtcatttgtgtccttatcgggaccgta
aatgctcccgcatcgcttttgggcttgctaaagacactctcaacctgggatgagttcctt
ccagttttgttaatgggcgaaaattcttcccttgacttgcctgaggaccagcgccgccgg
gtgctttccaccttggaaatgccgccgagctacagcaaattgctcgattcgctgcaccgt
gcccaggtttatcgcgagatgtacgaccaggcccgcgagcgcggtcggcaccgtgaaccc
aatcttttccgcagccttgtcggcaccagccgtgcgatccagcatgtgcgccagatgatg
cagcaggtggccgacaccgacgccagcgtgctgatcctgggcgagtccggcaccggcaag
gaagtggtcgcgcgcaacctgcattaccattccaagcgtcgcgaggcgccgttcgtgccg
gtcaactgcggtgcgatcccggccgagttgctggaaagcgaattgttcggccacgagaag
ggcgcgtttactggtgcgatcaccagccgcgccgggcgtttcgaattggccaacggtggc
acgctgttcctcgatgagatcggcgacatgccgctgccgatgcaggtcaagctgttgcgc
gtgctgcaagagcgcacgttcgagcgcgtgggcagcaacaagacccagagcgtcgacgtg
cggatcatcgccgcgacccacaagaatctcgagagcatgatcgaggtcggcagtttccgc
gaagacctctattaccgcctcaacgtgttcccgatcgaaatggcgccgctgcgtgagcgg
gtcgaagacatcccgctgctgatgaacgaattgatctcgcgcatggagcatgagaagcgc
ggttcgatccgcttcaactcggcggcgatcatgtccctctgtcgccatggctggccgggc
aacgtccgcgagctggcgaacctggtggagcgcatggcgatcatgcacccctacggtgtg
atcggcgtcgctgagctgccgaagaaattccgctacgtcgatgatgaagacgagcaaatg
gtcgacagcctgcgcagcgacctggaagagcgcgtggcgatcaacggccatacgccggat
ttcaccagcaatgccttgttgccgccggaaggcctggacctcaaggactacttgggcggc
ctggagcaaggcctcatccagcaggccctggacgatgccaacggtatcgtggcccgcgcg
gcggagcgcttgcgtatccgccgtacgaccctggtagaaaagatgcgcaagtacggcatg
agccggcgcgaaggagatgaacaggcggatgattga
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