Pseudomonas alvandae SWRI17: KSS97_21475
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Entry
KSS97_21475 CDS
T07736
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
palv
Pseudomonas alvandae SWRI17
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
palv03009
]
KSS97_21475
Enzymes [BR:
palv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KSS97_21475
Ribosome biogenesis [BR:
palv03009
]
Prokaryotic type
rRNA helicases
KSS97_21475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Microtub_bd
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXI52081
LinkDB
All DBs
Position
complement(4869344..4870690)
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AA seq
448 aa
AA seq
DB search
MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILN
RLIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRK
VPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECVNRQQTM
LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNSTTRQQIITADHNQHKEQIVNWLLAN
ETYEKAIVFTNTRAMADRIYGRLVAQEYKAFVLHGEKDQKDRKLAIDRLKQGGVKILVAT
DVAARGLDVDGLDMVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIER
YLKQSFERRTIKEVKGTYGGPKKVKASGKAVGVKKKKVDAKGDKKKTGAKAPTKRKTANR
PKTDAPSLVSKDGMAPLKRRKPEAPAAE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgctcaaagccgtggccgagcttaaattt
gtcgagccaacgccggtgcaggcagcggctattccgctcgcgctccaagggcgtgacctg
cgggtgacggcgcaaaccggcagcggcaagaccgccgcgttcgtgctgccgatcctcaac
cgcctgatcggcccggccaagatccgcgtcagcatcaagaccctgatcctgctgccgacc
cgtgaactggcccagcagaccttgaaggaagtggagcgcttctcgcagttcaccttcatc
aagtccggcctgatcactggcggcgaagacttcaaggtccaggccgccatgctgcgcaag
gtgccggacattctgatcggtacaccgggacggatgatcgagcaactgaacgccggcaac
ctcgacctcaaggaagtcgaagtgctggtgctggacgaagccgaccgtatgctggacatg
ggctttgccgaagacgtgcagcgcttggtggacgaatgcgtcaatcgccagcagaccatg
ctgttctctgccaccaccggcggttcgggcttgcgcgagatgatcgccaaggtgctgaac
aaccctgagcatttgcagctcaacgcggtcagccaactgaactccaccacccgccagcag
atcatcaccgctgaccacaaccagcacaaagagcaaatcgtgaactggttgctggccaac
gagacctacgaaaaagccatcgtcttcaccaacacccgggccatggccgaccgcatctac
ggtcgcctcgttgcccaggaatacaaggcgttcgtgctgcacggcgagaaagaccagaag
gaccgcaagctggccatcgaccgcctgaagcagggcggcgtgaaaatcctcgtcgccacc
gacgtcgctgcccgtggcctggacgtggatggcctggacatggtcatcaacttcgacatg
ccccgcagcggcgatgaatacgtgcaccgcatcggtcgtaccggtcgtgccggcaacgac
ggcctggcgatctcgctgatctgccacggcgactggaacctgatgtcgagcatcgagcgc
tacctcaagcagagcttcgaacgccgcaccatcaaggaagtcaaaggcacgtatggcgga
ccgaaaaaggtcaaggcatcgggcaaggccgttggcgtgaagaagaaaaaggtcgacgcc
aagggcgacaagaaaaaaaccggcgccaaggccccgaccaaacgcaagaccgccaaccgc
ccgaagaccgacgccccgtcgctggtcagcaaggacggcatggccccgctcaagcgccgc
aagccagaggcgccggcggctgagtga
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