Pseudomonas alvandae SWRI17: KSS97_22245
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Entry
KSS97_22245 CDS
T07736
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
palv
Pseudomonas alvandae SWRI17
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palv03021
]
KSS97_22245 (rapA)
Transcription machinery [BR:
palv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
KSS97_22245 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QXI52229
UniProt:
A0ABX8QBL9
LinkDB
All DBs
Position
5027515..5030361
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AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DVITHFEGWKMTVREVDDVDGLLVYHGLNAQNEVVTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLEHTSRQLQSPLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLIIHRQLLSGRANRILILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
SNPFEDTQLALVALEWLVEDEKAQDALFAAGWDLMVVDEAHHLVWHEDHVSPQYALVEQL
AETIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLQAFRAESENYRPVAEAVQELLDK
GRLSPQAHKTIQGFLGNEGEALLTAVNDGDIEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHAYPLPCPDEYLELPLGDHAELYPEVSFQAQPDASEEERWWKFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVLFDLPSHPDLLEQRIGRLDRIGQKHTIELHVPYLETSP
QARLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLEEADDGDWQALIDEARAERERLE
AELHTGRDRLLELNSGGAGEGDALVEAILEQDDQFALPIYMETLFDAFGIDSEDHSDNAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLAARVSF
ETLNDQLESVPRASANKFIQAQRDQLAPRINAGEEKITPRHAERVAEAQRRLAADTEEEL
ARLTALQAVNPTVRDSELEALRRQREQGLAMLEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagtgacagcgaagccgagctgggt
ttaggcaccgttctggcacaggacggccgcttgttgaccgtgctctatccggccactggc
gacactcgccagtacgcgctacggaatgcgcccctcactcgcgtgcggttttcgccgggt
gacgtgatcactcacttcgaaggctggaaaatgaccgtgcgcgaagtcgatgacgtcgac
gggctgctggtctatcacggcctcaacgcacagaacgaagtcgtcacgctgccggaaacc
caactgtcgaacttcatccagttccgcctggccagcgaccgcctgttcgccggccagatc
gatcccctggcgtggttctccctgcgctaccacacgctggaacacaccagccgccaattg
cagtccccgctatggggcctgggtggcgtacgtgcccagccgattgcccatcaactgcac
atcgcccgcgaagtggccgaccgcatcgcgccgcgcgtgttgctggcggacgaagtgggc
ctgggcaagaccatcgaagccggactgatcattcatcggcaactgctctccggccgtgcc
aaccgcatcctgatcctggtgccggaaaacctccagcaccaatggctggttgaaatgcgt
cggcgcttcaatctgcaggtggcgctgttcgacgaagagcgtttcatcgaaagtgatgcc
agcaacccgttcgaagacacccaactggcgttggtggcactggaatggctggtggaagac
gagaaagcccaggacgcgctgtttgccgcgggttgggatctgatggtcgtcgacgaagcc
caccacctggtgtggcatgaagatcacgtcagcccgcaatatgcgctggtggagcagctg
gccgaaaccatccccggcgtgttgctgctcaccgcgaccccggagcaactcggccaggac
agtcacttcgcccgcctgcgcctgcttgacccgaatcgtttccatgacctgcaggccttc
cgcgccgaaagcgaaaactatcgcccggtggccgaggccgtccaggagctgctggacaaa
ggtcgactctcgccccaagcccacaagaccatccagggtttcctgggtaacgaaggcgaa
gcactgctgaccgccgtcaacgatggcgacatcgaagccagcgcccgcctggttcgcgag
ctgctggaccgccacggcaccggccgcgtgctgttccgcaatacccgcgccgccgtacaa
ggcttccccgagcgcaagctgcacgcctatccactgccgtgcccggacgaatacctcgaa
ctgccattgggcgatcacgccgagctgtacccggaagtcagcttccaggcccagccggac
gccagcgaagaagagcgctggtggaagttcgacccgcgcgtcgagtggctgatcgaccaa
ctgaaaatgctcaagcgcaccaaggtcctggtgatctgcgcccacgcggaaaccgccatg
gacctggaggacgccctgcgcgtgcgctccggcattccggccacggttttccacgaaggc
atgaatatcctcgagcgtgaccgtgccgccgcctacttcgccgatgaagagttcggcgcg
caagtgctgatctgttcggaaatcggcagcgaaggccgcaacttccaattcgctcaccac
ttggtcctgttcgacctgccgtcgcacccggacctgttggagcagcggatcggccgcctg
gatcggatcggccagaaacacaccatcgagctgcacgtgccctacctggaaaccagcccg
caagcgcggctgttccagtggtatcacgaagcactgaatgccttcctcaacacctgcccg
accggcaacgccttgcagcatcagttcggtccgcgcctgttgccgttgctggaagaagcc
gacgatggcgactggcaagcgctgatcgatgaggcccgcgccgagcgcgagcgcctggaa
gccgagctgcacaccggtcgcgaccgcctgctggagctcaactccggcggcgcaggcgaa
ggtgacgcgctggtcgaagcgattctcgaacaggacgaccagttcgccctgccgatctac
atggagaccctgttcgacgccttcggcatcgacagcgaggaccactccgacaacgcgctg
atcctcaagccgagcgaaaaaatgctcgacgccagtttcccgctgggcgacgacgaaggc
gtgaccatcacctatgaccgcaaccaggcgctgtctcgcgaagacatgcagttcatcacc
tgggagcatccgatggtgcaaggcggcatggacctggtgctgtccggctccatgggcaac
accgccgtggcgctgatcaagaacaaggcgctcaagcccggcaccgtgctgctggaactg
ctgtacgtcagcgaagtggttgccccgcgctcgctgcaactgggccgctacctgccaccg
gccgccttgcgctgcctgttggacgcgaacggcaacgacctggcggcccgggtctcgttc
gagaccttgaacgaccagctcgaaagcgtgcctcgcgccagcgccaacaagttcatccag
gcccagcgtgaccagctcgcgccgcggatcaatgccggcgaagagaagatcaccccgcgt
cacgccgaacgcgtggccgaggctcaacgtcgcctggcggctgataccgaggaagaactg
gcccgcttgaccgcgctgcaagcggttaaccctactgttcgggacagtgagctggaggca
ctgcgccggcaacgtgagcaggggttggcgatgctggagaaggcggcgttgcggttggag
gcgattcgggtgttggtggccgggtga
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