Pseudomonas alvandae SWRI17: KSS97_23605
Help
Entry
KSS97_23605 CDS
T07736
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
palv
Pseudomonas alvandae SWRI17
Pathway
palv03410
Base excision repair
palv03430
Mismatch repair
palv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KSS97_23605 (recJ)
03430 Mismatch repair
KSS97_23605 (recJ)
03440 Homologous recombination
KSS97_23605 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palv03400
]
KSS97_23605 (recJ)
DNA repair and recombination proteins [BR:
palv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KSS97_23605 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KSS97_23605 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KSS97_23605 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QXI52488
LinkDB
All DBs
Position
complement(5308855..5310564)
Genome browser
AA seq
569 aa
AA seq
DB search
MRIEPRQLPDTLPFLGDLPPLLTRLYAARGVQSAVELDKSLARLIPYQQLKGIDAAVDLL
VTALEHRQRILIVGDFDADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEV
ALEREPQLLITVDNGISSVEGVAAAKAAGLKVLVTDHHLPGLELPAADAIVNPNQPGCDF
PSKALAGVGVIFYVLMALRARLRSLGWYATKPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGIKAILEVAKRDPSRITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLTDDPALAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPVESMPFGLCLFDPQWHQG
VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVPGFHIRDALSVVAAQHPTLISKYGG
HAMAAGLTLPEANFPMFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA
GPWGQHFPEPMFHGVFQLVEQRVVGERHLKVILKSECGSVKLDGIAFGIDREIWPNPTVR
WVELAYKLDLNEFRGQETVQLMIAHIEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatagaaccccgccagttacccgacaccctgccattcctcggtgacctgccgccg
ctgttgacccgcctgtacgccgcccgaggcgtgcaatctgcggttgaattggataaaagc
ctggcacgcctgatcccttaccagcagctcaagggaatcgacgccgcagtagacctgctg
gtgacggcgctggaacaccggcagcgcatcctgatcgttggcgatttcgatgcggacggt
gcgaccgccagcacggtaggggtattgggcctgcgcctgctcggtgcggcccatgtcgat
tacctggtgcccaaccgcttcgaatatggctacggattgactccggaaatcgttgaagtc
gccctggagcgcgagccgcaattgctgatcaccgtggacaatggcatttccagcgtcgaa
ggcgtggcggcggcgaaagccgcgggtctcaaagtgctggtcaccgaccaccacctgccc
ggcctcgaattgccggcggctgatgccatcgtcaacccgaaccaaccgggttgtgatttt
cccagcaaggcactggcgggcgtcggcgtgattttttacgtgctgatggccctgcgggca
cgcttgcgcagcctgggctggtatgccaccaagccccaaccgaacatcggcgagctgctg
gacctggtggcgctgggcagcgtcgccgacgtggttcctttggacgccaataaccggatc
ctggtgcaccagggcctggagcgtattcgcgccggccgcgcccgtcccgggatcaaggcg
atcctcgaagtggccaagcgcgacccgtcgcgtatcacgtccaccgatctcggtttcatt
ctcggcccgcgactgaatgcggcggggcgcctggatgacatgagcctgggcatcgaatgc
ctgctcaccgatgacccggcgctggcgcgggaaatggcggcgcaactggatggcatgaac
caggaccgcaagtccatcgaacagggcatgcagcgcgaagcgctggcccagctcaaggat
ttgccggtggagtcgatgccgttcggtttatgcctgttcgatccgcagtggcaccaaggg
gttatcggcatcctcgcgtcgcggatgaaagagcggtatttccgtccgaccattgccttt
gccgatgccggggacggtttgctcaaaggctccggccgctcggtaccgggttttcatatt
cgcgatgcgctgagcgtcgttgccgcgcagcatccaacgctgatcagcaaatacggcggt
catgccatggcggcggggctgacgttgcccgaggcaaactttccgatgttcgccgaggca
tttgatgcggaagtgcgcaggcaattgcgtgaagaagacctgaccggccggctgttgtcc
gacggcaccctggcggtggaggagttccacctggaactggcccgggcgctgcgtcacgcc
ggcccttggggccagcacttccccgagccgatgttccatggcgtgttccagttggtcgag
cagcgcgtggtgggcgagcggcacctgaaggtcatcctcaagagcgagtgcggctcggtg
aagctcgatggcatcgcctttggtatcgaccgcgagatctggccaaatcctacggtgcgc
tgggtcgaactcgcctacaagctcgacctcaacgagttccgcggccaggaaacggtgcag
ttgatgattgcccatatcgaaccgcggtag
DBGET
integrated database retrieval system
