Pseudomonas alvandae SWRI17: KSS97_24265
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Entry
KSS97_24265 CDS
T07736
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
palv
Pseudomonas alvandae SWRI17
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palv03400
]
KSS97_24265 (phrB)
Enzymes [BR:
palv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KSS97_24265 (phrB)
DNA repair and recombination proteins [BR:
palv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KSS97_24265 (phrB)
Prokaryotic type
KSS97_24265 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QXI56202
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All DBs
Position
5445717..5447150
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AA seq
477 aa
AA seq
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MQLIWLRSDLRLHDNTALAAAAAAGPCVAVYLMSPGQWRAHDDAPCKIDFWLRNLASLSA
ALNTLNIPLLIRHASHWDQAPQVLATLCRELNISAVHANEEYGVNETRRDGEVARTLKDQ
GVAFHGYLDQLLFRPGSVLTRTGNYFQVFSQFRKVCYQRLNLSLPNLVPAPTGQARTAIA
SDPVPAHVEGFAPPSEALRALWPAGENEARRRLDAFIDQHIDEYQRERDFPAHPGTSQLS
AYLVAGVVSPRQCLHAALQANQGEFESGSAGTVAWINELLWREFYKHILVGYPRVSRHRA
FRPETEALAWRKAPDELEAWQQGRTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSASTGTDSAPWFRIFNPLSQSEKFDREGLFIK
RWIPELNDIDGLRVHSPNAQVNLFDAVQYHRPIVDLAESRARALTAFRNLPARQDMG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgatctggctgcgcagcgacttgcgcctgcacgacaacaccgccctggcggca
gccgcagccgcgggcccctgcgtggcggtgtacctgatgagccccgggcaatggcgcgcc
catgacgatgctccctgcaagatcgatttctggctgcgcaacctcgcctcgttgagtgcg
gcgctgaacacattgaacattccgctgctgattcgccacgcttcgcactgggaccaggcg
ccccaggtgctggcaacactgtgtcgcgaattgaatatcagcgccgtgcatgccaacgaa
gaatacggcgtgaacgaaacccggcgtgatggcgaggttgctcgaaccctgaaggatcaa
ggcgtggcgttccacggttaccttgatcaactgctgttccggcccggcagcgtcctgacc
aggaccggcaactatttccaagtgttcagccagtttcgcaaggtgtgctaccagcgcttg
aacctttcgctacccaatctggttcccgcgccgaccggacaagcccgcacggccatcgcc
agcgatccggtgcccgcacacgtcgaaggtttcgcacctcccagcgaggcgctacgtgcc
ctctggcctgccggcgagaacgaggcccgacggcggctggacgcctttatcgatcaacac
atcgatgaataccagcgagagcgcgacttccccgcccaccccggcaccagccagctttcg
gcctatctggtggccggcgttgtttcaccacgccagtgcctgcacgctgcgctgcaagcc
aaccagggcgaattcgagagcggaagtgccggtaccgtggcctggatcaatgaattgctc
tggcgcgagttctataaacacattcttgtgggctatccacgcgtgtcgcgccatcgcgcg
ttccgcccggaaaccgaagcgctggcctggcgcaaggctcccgacgaattggaagcctgg
cagcagggccgcaccggcctgccgattatcgacgcggccatgcgtcaattattggagacc
ggctggatgcacaaccgcctgcggatggtggtcgccatgttcctgaccaagaatttgctg
atcgactggcgcgaaggcgaacgttttttcatgcgccacctgatcgacggggacttggcc
gccaacaatggcggctggcagtggagtgcttccaccggcacggattccgcgccctggttc
cgcatcttcaaccccttgagccaatcggaaaaatttgatcgcgagggactgtttatcaaa
cggtggatacctgaactgaacgatatagacgggctacgggtccatagcccaaatgcacaa
gtcaatctgtttgacgcggtgcaataccatcggccgatcgtcgacctggccgaatcccga
gcacgtgcgctgacagccttcaggaatctgccagcgcgacaagacatgggatga
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