Pseudomonas alvandae SWRI17: KSS97_25365
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Entry
KSS97_25365 CDS
T07736
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
palv
Pseudomonas alvandae SWRI17
Pathway
palv03030
DNA replication
palv03430
Mismatch repair
palv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KSS97_25365 (holA)
03430 Mismatch repair
KSS97_25365 (holA)
03440 Homologous recombination
KSS97_25365 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palv03032
]
KSS97_25365 (holA)
03400 DNA repair and recombination proteins [BR:
palv03400
]
KSS97_25365 (holA)
Enzymes [BR:
palv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KSS97_25365 (holA)
DNA replication proteins [BR:
palv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KSS97_25365 (holA)
DNA repair and recombination proteins [BR:
palv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KSS97_25365 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
CCCAP
Motif
Other DBs
NCBI-ProteinID:
QXI52819
LinkDB
All DBs
Position
5682311..5683348
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLGKHLQGALAPVYIISGDDPLLCQEAADAIRSAARQQGFDERQVFAADASFDW
GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALIEYCSRPAEDTVLLISLPKLDGSA
QKTKWGKALVEGPQTQFVQIWPVDVSQLPSWIRQRLSQAGLSASQDAVELIAARVEGNLL
AAAQEIEKLKLMAEGGQITVETVQAAVADSARFDVFGLTDAILNGEAAHALRMLEGLRGE
GVEPPVILWALARELRLLANLSLQYSQGVPLDKAFSQARPPVWDKRKPLMSKALQRYSTS
RWAQLLLEAQRIDAQIKGQAAGSPWMSLSRLSLLMAGQRLPLPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgctcccgcgcaactcggcaaacacctgcaaggcgctctcgcgccggtctat
atcatcagcggcgatgacccgctgctgtgccaggaagccgccgacgccatccgctccgcc
gctcgccagcaaggtttcgacgaacgccaggtgttcgccgccgacgccagttttgactgg
ggtacgttgttgcaggccggggcaagcatgtcgctgtttgccgagaaacgcctgctggaa
ctgcgcctgccttccggcaagcccggtgacaaaggtgccgccgcgctgatcgaatattgc
tcgcgcccggccgaagacacggtgctgctcatcagcctgccgaaactcgacggcagtgcg
cagaaaaccaagtggggcaaggccctggtcgaaggaccgcagacccagttcgtgcagatc
tggccggtggacgtcagccagttgccaagctggatccgccagcgtctgtcccaggccggg
ctgtcggccagccaggacgcggtggaattgatcgccgcccgggtcgaaggcaacctgctg
gccgccgcccaggaaattgaaaagctcaagctgatggccgaaggcgggcagatcaccgtg
gaaacggtccaggccgccgtggccgacagcgcccgcttcgacgtcttcgggctgaccgat
gcgattctcaacggcgaagccgcccatgccttgcgcatgctcgaaggcctgcggggcgaa
ggcgtcgaacctcccgtgatcctctgggccctggcccgggagctgcggctgctggccaac
ctgtcgctgcaatacagccagggcgtgcccctggacaaggccttcagccaggcccgtccg
cctgtgtgggataaacgcaaaccgctgatgagcaaagccctgcagcggtactcgacgtca
cgctgggcacaactgctgctggaagcccagcgcatcgatgcgcagatcaagggccaggca
gccggctcgccgtggatgagcctcagtcggttgtcgttgttgatggcggggcagcggttg
ccactgccagctgaataa
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