Pseudomonas alvandae SWRI17: KSS97_25500
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Entry
KSS97_25500 CDS
T07736
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
palv
Pseudomonas alvandae SWRI17
Brite
KEGG Orthology (KO) [BR:
palv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palv03000
]
KSS97_25500
Transcription factors [BR:
palv03000
]
Prokaryotic type
Helix-turn-helix
Other families
KSS97_25500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
HTH_8
AAA_lid_14
Sigma54_activ_2
GAF
AAA_5
PAS_4
AAA
PAS_8
HTH_23
PAS_9
AAA_2
HTH_7
HTH_30
HTH_20
Diguanyl_cycl_sensor
HTH_28
Mg_chelatase
nSTAND6
HTH_22
nSTAND3
HVO_A0261_N
AAA_16
HTH_17
HTH_50
Mga
HTH_10
IclR_C
Motif
Other DBs
NCBI-ProteinID:
QXI52844
UniProt:
A0ABX8QDB1
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Position
complement(5708676..5710580)
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AA seq
634 aa
AA seq
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MHSNHLSRHAQQVLTVTQGKAHLQGPGSDPSIARSWLRCLEDYHLDPAQNLAPTVLEHGR
VLESRERLQQVLHIAGTEMTSLHQQLSGAGHAVLLTDARGVILNCVTAPSERKIFERAGL
WLGADWSEACEGTNGIGTCLVERQALTIHQEEHFRGRHTGLTCSASPVFDPQGELLAVLD
VSSARPDVSRQSQFHTMALVNLSAKMIESCYFLRCFDNQWLLRFHLQAESVGLFSEGLMA
FDGEGRICAVNQSALNLLGHIRGGLLGQRVEDFFDCSLDELMGRASAQASASWPLRTRDG
RHLFAVLRGQPRSVPVPVAPAFKVIEPARLPGICLGDAALQEHFRKALRVFERDVPLLIH
GETGSGKEAFAKAVHHASQRAGKNFVALNCAAIPESLIESELFGYRGGSFTGARKEGMRG
KLQQADGGTLFLDEIGDMPLALQTRLLRVLEDRQVVPIGGEPEAVNVRIISATHRQLLDR
VRDGSFREDLYYRLNGLEIPLPALRERSDKSQLLDFLLAEESGGETVFIDEPARQVLLGF
DWPGNVRQLRNVLRTLAALCDGGRIGLEDLPAMIRQRSVVMVEAPTEHPLEDAERLALLD
ALERQRWHMTHTAEQLGISRNTLYRKLRKHAIAR
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcaaccatttgagtcgccatgcccagcaagtcctgacggtcacccagggcaag
gcccatttgcagggacctggcagcgatccgtcgattgcccgttcctggctgcgctgcctc
gaggactatcacctcgacccggcccagaatctggcgccgacggtgctcgagcacggccgg
gtgctggagagtcgcgagcgcttgcagcaagtgctgcacatcgccggcacggaaatgacc
agcctgcatcagcaactctccggcgccggccacgcagtgctgctgaccgacgcccggggc
gtgatcctcaattgcgtcaccgctcccagcgaacggaagattttcgagcgggccggcctc
tggctcggcgccgactggagcgaagcctgcgaaggcaccaacggcatcggcacctgcctg
gtggagcgccaggccctgaccattcaccaggaagaacatttccgcggccgccacaccggc
ctgacctgctcggccagcccggtgttcgatccacagggcgaactgctggcggtgctcgac
gtgtcctcggcgcggccggacgtgtcgcgccagagccaattccacaccatggcactggtc
aacctctcggcgaagatgatcgagagctgttatttcctgcgttgcttcgacaatcaatgg
ctgctgcgctttcatttgcaggccgagtccgtggggctgttcagtgaagggctgatggcg
ttcgacggcgaagggcgaatttgcgcggtgaaccagagcgcgctgaacctgctcgggcat
atccgcggtggcttgctgggtcagcgggtcgaggattttttcgattgttccctggatgaa
ttgatgggccgggccagtgcccaggccagcgccagttggccgctgcgcacccgcgatggc
cggcacctgttcgccgtgttgcgcggccagccgcgcagcgtgccggtgccggtcgcgccg
gccttcaaggttatcgagccggcccgtctgccggggatctgcttgggggatgcggcgttg
caggagcattttcgcaaggcgctgcgggtgttcgagcgcgatgtgccgctgctgatccac
ggcgaaaccggctccggcaaggaggcgttcgccaaggccgtgcaccacgccagccagcgc
gccgggaaaaattttgtcgccctcaattgtgcggccattccggaaagcctgatcgagagc
gagctgttcggttatcgcggcggcagtttcaccggggcgcgcaaggaaggcatgcgcggc
aagctgcagcaggctgacggcggcacgctgttcctcgatgaaatcggcgacatgcccctg
gctttgcagacccggttactgcgggtgctggaggatcgccaggtggtgcccatcggcggc
gagcccgaggcggtgaacgtgcgcatcatcagcgccactcaccgacagttgctcgatcgg
gtgcgggatggcagcttccgtgaggatttgtactaccgcctcaatggcttggaaatcccg
ctgccggcgttgcgcgagcgcagtgacaaatcgcagttgctggatttcctgctggccgag
gagagcggcggcgaaacggtctttattgacgagccggcgcgccaggtgttgctggggttc
gactggccgggcaatgtgcggcaattgcgcaatgtgttgcgtaccctcgctgcgttgtgt
gatggcggacggatcgggctggaggatctgccggcgatgatccgccagcgctcggttgtg
atggttgaagccccgactgaacacccattggaagatgccgagcgcctggcattgctcgat
gcactggagcgccagcgctggcacatgacccacaccgccgaacaactggggatcagccgc
aataccctttaccgcaagctgcgcaaacacgcgattgcccgctga
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