KEGG   Pseudooceanicola algae: PSAL_001430
Entry
PSAL_001430       CDS       T06943                                 
Symbol
cshB
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
palw  Pseudooceanicola algae
Brite
KEGG Orthology (KO) [BR:palw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:palw03400]
    PSAL_001430 (cshB)
Enzymes [BR:palw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PSAL_001430 (cshB)
    5.6.2.6  RNA 3'-5' helicase
     PSAL_001430 (cshB)
DNA repair and recombination proteins [BR:palw03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PSAL_001430 (cshB)
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: QPM88940
UniProt: A0A418SI63
LinkDB
Position
complement(153202..155619)
AA seq 805 aa
MTTQLPPSLPPQFRDWFTTRGWDLHPHQAEMLARAHDPSLLLVAPTGGGKTLAGFLPSLL
ELAGGDHSGLHTLYISPLKALASDIRRNLETPVAEMGLPIRIEDRTGDTSYTRKRRQRAD
PPHILLTTPESLALLTSYEDAPRIFAGLQRVVVDEIHALAESKRGDQLMLALARLDSLCP
GLRRVGLSATVEDPPALARFMARAPQPCHVLMADPGPAPDIAMLSTAAPPPWSGGGGIHA
MEEVLEQVRKHRITLIFHNTRAQAEIFFHHLWMANSEGLPIGIHHGSLDRVQRERVEKAM
VQGRLRAVVCTGSLDLGIDWGDVDLVIQVGAPKNVKRLVQRIGRANHRYNAPSKALLVPA
NRFEVVECLAALEAARDNDLDGDPRGPGPLDVLCQQILITACAGPFDADALFDEFRRAGP
YAALTRDRFEACLDYVATGGYALRAYDQWQRLKQRPDGQWQLRDPRASQLIRMNIGTIQD
SDMLKVRLKRGGGKPLGEVEEGFAASLTAGDTFLIGGRIVRYEGLRDLVVEVSRDAGRKP
KVAVFSGTKFATSTQLSQRILRLFQQDSWPGLPAHTAEWLTLQRQVSRLPEPGRLLLESF
PHDGRHHLVAYGFAGRNAMQTLGLLLTKRMEEQGLAPLGFVATDYATLIWGLEDVQDPEP
LFDPEALRDGLDGWLAGNAVMKRTFRSAATVAGLMNRNTPQARKTGRQATFSSDILYDTL
LKYDPDHLLMQITRDEAMRGLVDFARIEDLTRRIAGRIDHVRLDRVSPLAAPLFLEVGRV
PVVGEGRDRLEAAESDRLMRAAGLL
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgacgacgcaattgcccccttccctgccgccgcagttccgcgactggttcaccacgcgt
ggctgggatctgcacccccaccaggccgagatgctggcgcgcgcgcacgatccgtccctg
ctgctggtggcacccaccgggggtggcaagaccctggcgggcttcctgccgagcctgctg
gaactggccgggggcgatcacagcgggttgcataccctctatatctcgccgctgaaggcg
ctggcctcggacatccggcgcaacctggaaacgcctgtggccgagatgggcctgccgatc
cggatcgaggaccgcaccggcgatacctcttatacccgcaagcgacggcaaagggccgat
ccgccccatatcctgctgaccacaccggaaagcctcgcgttgctcaccagctacgaagac
gcgccgcggatctttgccgggttgcagcgcgttgtggtcgatgaaatccacgccctggcc
gaaagcaagcgcggagatcagctgatgctggcgctggcgcggctcgacagcctctgcccc
ggcctgcgccgtgtcggcctgtccgccacggtcgaggacccgcccgccctcgcccgcttc
atggcccgtgcaccgcagccctgtcacgtgctgatggccgaccccggcccggcgcccgac
atcgcgatgctgtcaacggccgcgccgccgccctggtccgggggcggtggcattcacgcg
atggaagaagtgctggaacaggtgcgtaaacatcgcatcaccctgatcttccacaatacc
cgcgcccaggccgagatctttttccatcatctctggatggccaatagcgaaggcctgcca
atcggcatccatcatggctcgcttgaccgggtgcagcgcgaaagggtcgaaaaggccatg
gtgcagggccgcttgcgggccgttgtctgcaccggcagtctcgaccttgggatcgactgg
ggcgacgtggacctggtgatccaggtcggcgcgcccaagaacgtcaaacggctggtacag
cgcatcgggcgggccaatcaccgctacaacgcgccctccaaggcgctgctggtgcccgcc
aaccgctttgaggtggtcgaatgcctggccgcgctggaggccgcgcgcgacaatgatctg
gacggcgatccgcgcgggccggggccgctggacgtgctctgccagcagatcctgatcacc
gcctgcgccgggccctttgacgccgatgcgctgttcgatgaattccgccgtgccgggccc
tatgcggccctgacccgcgacaggttcgaggcctgtctcgactatgtggcgaccgggggc
tatgccctgcgcgcctacgaccagtggcagcgcctgaaacagcgccccgacggccaatgg
cagttgcgcgacccccgcgccagtcagctgatccggatgaacatcggcacgatccaggac
agcgacatgctgaaggtccggctgaaacgcggcggtggcaaacctctgggcgaggttgaa
gagggctttgccgcctcgctgacggcgggggacaccttcctgatcggcgggcggatcgtg
cgctatgaaggcctgcgcgatctggtggtcgaggtcagccgcgacgcgggccgcaagccc
aaggtcgcggtgttttccggcaccaagttcgccacctcgacgcagttgtcccaacgcatc
ctgcgcctgttccagcaggacagttggcctggcctgcccgcccataccgccgaatggctg
accctgcagcgccaggtctcgcgcctgcccgaacccggccggctactgctggagagcttt
ccccatgacgggcgtcaccacctggtcgcctacggttttgccggtcgcaatgcgatgcag
accctcggcctgctgctgaccaagcggatggaggaacagggcctcgcaccgcttggcttt
gttgccacggattacgccacgctgatctgggggctggaggacgtgcaggaccccgagccg
ttgttcgaccccgaggcgctgcgcgacgggctggacggttggctggcgggcaatgcggtg
atgaagcggacctttcgatccgccgcgaccgttgccggtctgatgaaccgcaacaccccg
caggcgcgaaagaccgggcggcaggcgaccttttcgtcggacatcctttacgacaccctg
ctgaaatacgaccccgaccacctgctgatgcagatcacgcgggacgaggcgatgcggggt
ctggtcgatttcgcccggatcgaggatctgacccgccgcatcgccgggcggatcgatcat
gtccggctggatcgcgtcagcccgctggccgcgcccctgttccttgaggtcggcagagtc
ccggtcgtcggcgagggccgcgaccggctggaggcggcggaatccgaccgcctgatgcgc
gccgccggattgctgtga

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