Pseudooceanicola algae: PSAL_004400
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Entry
PSAL_004400 CDS
T06943
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
palw
Pseudooceanicola algae
Pathway
palw00470
D-Amino acid metabolism
palw00550
Peptidoglycan biosynthesis
palw01100
Metabolic pathways
palw01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
palw00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSAL_004400 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PSAL_004400 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PSAL_004400 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
palw01011
]
PSAL_004400 (ddlB)
Enzymes [BR:
palw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PSAL_004400 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
palw01011
]
Precursor biosynthesis
Amino acid ligase
PSAL_004400 (ddlB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
QPM89225
UniProt:
A0A418SFN3
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All DBs
Position
468572..469492
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AA seq
306 aa
AA seq
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MGLSSRATPKVAVLMGGPSAEREVSLSSGRECAVALRDEGYEVAELIADVDLPARLAEID
PDVVFNALHGRWGEDGCVQGLLEWLRIPYTHSGVLASSLAMDKERTKAIYASVGLPIAES
LVATAPEIMAAHLMTPPYVVKPYNEGSSVGVYMVPDGSNTPPQLAPDMPETLMVEKFAPG
RELTVSVLGETPLCVTEIFTEGWYDYAAKYQPGGSRHVCPAQIPADIAQICLDYALKAHR
VLGCRGLSRTDFRWDDSKGAEGLILLETNTQPGMTPTSLSPEHAQAQGMSFGALCRWLVE
DASCER
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgggtctgtcgagcagggcaaccccgaaagtggcagttctcatgggtggaccctcggcc
gagcgcgaggtttctctgtccagtggtcgggaatgcgctgtcgctttgcgggatgaaggg
tacgaggtggccgagctgatcgcggatgtcgatctgccggcccgtctggccgaaatcgat
cccgatgtcgtcttcaacgccctgcatggccgctggggcgaagatggatgcgtacagggc
ctgctggaatggctgcgcattccctatacacattccggcgtgctggcctcgtcgctggcg
atggacaaggaacggaccaaggcgatctatgcctcggtcggactgcccatagccgaaagc
ctcgttgccactgctcccgagatcatggctgcgcatctgatgacgccgccctacgtggtg
aaaccctataacgaagggtcctcggtcggtgtctatatggtgccggacggcagcaacacg
ccgccgcaacttgcccccgacatgcccgaaaccctgatggtcgaaaaattcgcaccgggg
cgcgagctgaccgtgtcggtgctgggcgaaacaccgctttgcgtgaccgagatcttcact
gaaggctggtacgattacgcggccaagtatcaacccggcgggtcgcgccatgtctgcccg
gcccagatccccgcggacatcgcgcagatctgcctcgactacgccctgaaggcgcatcgg
gtgctgggctgtcgtggcctgtcgcgcaccgatttccgctgggacgacagcaagggggcc
gaagggctgatcctgctggaaaccaatacccagccgggcatgacgccgacctcgttgtcg
ccggaacatgcccaggcgcaggggatgtcctttggcgcgctttgccgctggctggtcgag
gatgcctcatgcgagagataa
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