Pseudooceanicola algae: PSAL_008160
Help
Entry
PSAL_008160 CDS
T06943
Name
(GenBank) hypothetical protein
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
palw
Pseudooceanicola algae
Brite
KEGG Orthology (KO) [BR:
palw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palw03000
]
PSAL_008160
Transcription factors [BR:
palw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSAL_008160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
P22_Cro
HTH_IclR
YdaS_toxin
MarR_2
Motif
Other DBs
NCBI-ProteinID:
QPM89595
UniProt:
A0A418SE12
LinkDB
All DBs
Position
complement(849454..850704)
Genome browser
AA seq
416 aa
AA seq
DB search
MTIFPEVPNLRHLRMVQVIGRLGGVSGAARALGTSQPAVTQALANLEAEIGTPIFERRTT
GTVPTAMGTLFLRRIDRFFDVLETAVGQVTSGSERPHSTAPVESLITGTQLRAFVVTSDP
AQLTETARQIGLSAASLLRAARTLERTLGCPLYDRAADGLPPNQTGRSLARQFRRAIREI
EFGRGEVLWNAGQAAPEVVIGTLTPSGNRDLAEAVHRFLNASPIARVRIITSTDPEQDLS
DSKIDMIFGALPPSGDRPGFETEALYRDSYCLLARAGHPLAATRNIHPEDLPGYDWLLAP
RGTASRAQMEALFADMANRPRPRMESSSPGMSRALLLSGDMVTLMPQSDARLDASLGILK
ILPCSHLDATFSIGITTLDDWLPTPAHLLFLTCLRATISERLGHVMIGTFIGEQVS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgacgatatttccggaggttcccaacttgcggcacctgcgcatggtgcaggtcatcgga
cggctgggcggggtcagcggcgccgcgcgcgcgcttggcacatcgcaacccgccgtgacc
caggccctcgccaacctcgaggcagaaatcggcacgccgatcttcgaacgtcgcaccacg
ggcacggtccccaccgcaatgggaacactgttcctgcgtcggatcgaccggttcttcgat
gtccttgagaccgccgtaggacaggtgacaagcggcagcgaacggcctcattcaacggcg
ccggtcgaaagcctgatcacaggcacccaacttcgcgcatttgtcgtgacatcggacccc
gcccagctgaccgagacggccaggcagatcggtctgtccgccgcatccctgttgcgtgca
gcccggacattggaacgcaccctgggttgccccctgtacgaccgcgcggcggatggcctg
ccccccaaccagaccggccgcagcctggcccgtcaattccgccgtgcaatccgggaaatc
gaattcggacgcggcgaggtcttgtggaacgccggtcaggccgctccggaagtcgttatc
ggcaccctgacaccttcaggaaatcgcgacctcgccgaggcggttcaccggttcctcaac
gccagtcccatcgcaagggtgcgcatcattacatcgaccgatccggaacaggatctttcc
gacagcaagatcgacatgatcttcggagccttgcccccgtccggggacaggcctggcttc
gaaaccgaggccctctatcgcgacagttactgcctgctcgcccgtgcgggccatccgctt
gccgcgacccggaacatccaccctgaagacttgccagggtatgattggctgctcgcaccc
cgcggcacagcaagccgcgcgcagatggaggcgctgttcgctgacatggcgaaccgacca
aggccccgcatggaaagcagttcaccgggaatgtcacgcgccctgctattgagtggcgac
atggtaacgctgatgccccagagcgatgcgcgactggacgccagcctcggtatcctgaaa
atcctgccctgcagccatttggacgcgaccttttccattggcatcacgacgcttgacgac
tggctgccgacccctgcgcatcttttgttcctgacctgcctgcgcgcaaccatctcggaa
cgactgggccacgttatgatcggcaccttcatcggagagcaagtttcgtga
DBGET
integrated database retrieval system
